Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0085 ATGGCTGAGACCTTGCTTGAAATTGTGCTGGAGAAATTGACCCCTTTGATCCTGAATGAATTTGCAGCCTTCTTTGGAATCAGGGAAAAGGCTGAAGAGCTAACACTCACTTTAGAACTGATCAAAGCTGTTCTTGATGATGCTGAGGAGAAACAATGGTCAAATCGTCCTCTCAAGGTGTGGCTGCAGCAGCTTAAAAATGCAATGTACGTGATGGATGATATCCTTGATCAGTTGTCTACTCAATCCTCTCAACCTGGGTGCTTCTCATCTTTGAATCCAAAGAAGGTGATTCATCGGCGTGAGCTTGGGAAGAAGTTGAATAAGATGATAGGGAGGTTGGATCGAATTGCTCAACGTAGGAGCAACTTTGATCTTAGACAAGTTGTGAGGAAAAGGTCAAGTGAAGTTGCTGAATGGCGCCAAACGAGCTCAACTATCGCCGTTCCTCAAGTGTACGGACGAGATGAAGATAAAAAGAGAGTTGTGGACTTTCTTCTTAGCTCATCACAAAGCTCTGAGTCTCTTTCCGTCTATGCCATTGTTGGATTAGGTGGTCTTGGGAAAACAACACTTGTTCAGATGGTCTACAACGATCAGCAAGTAGCTATGGAAGTGGACAAGTCTGAGGTCATGAATTTAGAAGAAATGGAGAAAAAAGTGAAAGTGTTGCTACAAAGTAAAAGGTATTTGTTGGTTTTAGATGATGTCTGGAAAAGAAGCCAAGAAATGGAATTGGGATTAACCCAAGACAAATGGGATAAGTTAAGATCTGTATTGTCTTGTGGATCTAAAGGCTCCTCCATTTTAGTATCCACTCGCGATGAGGATGTTGCAACAATTATGGGAGCATGCCAAGCTCATCATTTGGACCGTCTATCCGATGATGCTTGTTGGTCGTTGTTTAAACTGCGCGCATTTGGAGCTGACAAAGAAGAGCGTGCAGAGCTTGTAGCAATAGGCAAGAAGATCGTCAAGAAATGCGGAGGATCACCTCTTGCAGCACTGGCTTTAGGAGCTGTAATGCACTCAAGAAGTACAAAAAAAGAATGGCTTGAAGTTCAGAAAAGTGAGCTTTGGAGTTTACCAGATGAGAATGATATCATGCCTGTCTTGAGATTAAGCTACTCTTGTTTAACACCAACTCTAAAGCAGTGTTTTGCTTTCTGTGCCGTATTTCCCAAAGATACAGAAATCGAGAAGCAAGAATTGATTTATCTTTGGATGGCTAATGGATTCATTTCATCGAGGCCAAACTTGGAGGTAGAGGAGGTTGGCAACATGGTTTGGAATGAATTATACCAAAAATCATTGTTCCAAGATGTGAAGAGTGATGATTTTTCTGGCAAGATTTATTTCAAGATGCATGATTTAGTCCATGATCTTGCTCAATCAATTTCAGAGCAAGAGTATATATGCTTGGAAGAACAAAACCTTAATGATTCTTCAAGAAACCCCCATCATATTGTTTTTCACGGCATTTATAAAGATCAATTCAAGAAGAGAGCCTTTGAAAATGCTGAATCCTTGCGGACTATGTATCAACTGGATTCAGCTCCATTTCCCTTCAATTCTAGATTGGTTCCAACAAATCATTCTCTTCGGGTTTTGTGCATATATCCTACAAAGATACCATCATTTGGGAGTTTAAGTTGCTTGAGGTATTTGGAACTTCGTGATTTGGATATAAAGAGCTTGCCTGCTAGTATTTGCAATTTGCATAGATTGGAAATCTTGAAATTAATACAGTTGCCTTTTCTTAGCCGTCTACCGAAACACTTGACGAGGATGCAAAATCTCCGACATCTTGTCATTGATCCTTGTTATTCACTATCTGAAATGTGTCCAGACATTAAAAAACTGTGTGAATTGAGAACGCTAAGTAAATACATTGTGAAATGCAAGAAAGGGCATAGTTTGAAAGAGTTACGTCATTTGAATCTAGGAGGAAAGCTAATCATCGAAGGCCTAGGAAACATTGGGAGTATATCTGAAGATGAACATGCCAACTTGAAGGGTAAACAAGATCTTCGAGAACTAACCTTGTCATGGTCCAAAAGTGGTGATAAGACGAAGTTGAGAGTGGGAGCAGAAGAAGTACTTGAAGCGCTTCAACCTCACTCCACACTCGAACTGTTGACGATACAAGACTATGAGGGATTAGATTGGCCAACTTGGATGGGAAACAACAATTTAGTTTCTCTTCGACTTGTGTATTGTGGAAAGTGCAAGCGTCTTCCTCCAGTGGGAAAACTTCCAAATCTGAAGAAGCTTGTTGTGCAAAGTGGCATGAAGGATGTGCAGTACATTCAGAAAGATGAAAGTTATGATGGTGGTGAAGCAATGCCATTCCCAGCTTTGGAGGAATTGTATTTGTCCTACTTGCCAAACGTGGAGAGGTTGATGGAACGGGAAACAACACACATGTTCCCCTCTCTTTCTAAAATAGAAATCAGCGATTGCCCTAAACTGCAATTGCCATGCCTTCCAAGTGTTAAGGACCTCACTGTTTCCTATTGTAGCAATGAGCAACTGAAGTCAATCTCTAATCTCAACAGTCTTAACCAACTTCGTCTTTATAGAAGTGATGAAGTGTCGTGCTTCCCAGAAGGAATCATGAACAACATGACCTCTCTTGCAACTCTGGAAATAAAATATTTCAGAGAATTGAAGGAACTGCCATCTGACATCACAAAACTCACTGCTTTGTCTCATCTAACCATCTTTGACTGTGAAAAGCTGGAGTGTTTACCAGAACAGGGTTTCGAAGGGTTATCTTCACTTCAACGATTGTCAATTAACAAGTGTACGAGTTTGGGATCCTTGCCTGATGGTGTCCGGCACTTAACTTCACTTCAATATTTGAGTATTGTTGGCTGCCGAAAGTTGAAAGAGCGGTGTAAGGAAGGAACAGGGGAGGATTGGCACAAGATAGCACATGTTCCCCATGTAGATAACTGGTAA 2964 0.4092 MAETLLEIVLEKLTPLILNEFAAFFGIREKAEELTLTLELIKAVLDDAEEKQWSNRPLKVWLQQLKNAMYVMDDILDQLSTQSSQPGCFSSLNPKKVIHRRELGKKLNKMIGRLDRIAQRRSNFDLRQVVRKRSSEVAEWRQTSSTIAVPQVYGRDEDKKRVVDFLLSSSQSSESLSVYAIVGLGGLGKTTLVQMVYNDQQVAMEVDKSEVMNLEEMEKKVKVLLQSKRYLLVLDDVWKRSQEMELGLTQDKWDKLRSVLSCGSKGSSILVSTRDEDVATIMGACQAHHLDRLSDDACWSLFKLRAFGADKEERAELVAIGKKIVKKCGGSPLAALALGAVMHSRSTKKEWLEVQKSELWSLPDENDIMPVLRLSYSCLTPTLKQCFAFCAVFPKDTEIEKQELIYLWMANGFISSRPNLEVEEVGNMVWNELYQKSLFQDVKSDDFSGKIYFKMHDLVHDLAQSISEQEYICLEEQNLNDSSRNPHHIVFHGIYKDQFKKRAFENAESLRTMYQLDSAPFPFNSRLVPTNHSLRVLCIYPTKIPSFGSLSCLRYLELRDLDIKSLPASICNLHRLEILKLIQLPFLSRLPKHLTRMQNLRHLVIDPCYSLSEMCPDIKKLCELRTLSKYIVKCKKGHSLKELRHLNLGGKLIIEGLGNIGSISEDEHANLKGKQDLRELTLSWSKSGDKTKLRVGAEEVLEALQPHSTLELLTIQDYEGLDWPTWMGNNNLVSLRLVYCGKCKRLPPVGKLPNLKKLVVQSGMKDVQYIQKDESYDGGEAMPFPALEELYLSYLPNVERLMERETTHMFPSLSKIEISDCPKLQLPCLPSVKDLTVSYCSNEQLKSISNLNSLNQLRLYRSDEVSCFPEGIMNNMTSLATLEIKYFRELKELPSDITKLTALSHLTIFDCEKLECLPEQGFEGLSSLQRLSINKCTSLGSLPDGVRHLTSLQYLSIVGCRKLKERCKEGTGEDWHKIAHVPHVDNW* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0085 987 Pfam NB-ARC domain 207 356 IPR002182 GO:0043531
Amo09g0085 987 Gene3D - 6 122 - -
Amo09g0085 987 Gene3D - 292 375 IPR042197 -
Amo09g0085 987 Gene3D - 376 466 IPR036388 -
Amo09g0085 987 PANTHER OS05G0414200 PROTEIN 29 829 - -
Amo09g0085 987 PANTHER DISEASE RESISTANCE PROTEIN RP 29 829 IPR044974 GO:0006952
Amo09g0085 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 390 IPR027417 -
Amo09g0085 987 Pfam Rx N-terminal domain 6 87 IPR041118 -
Amo09g0085 987 Gene3D Ribonuclease Inhibitor 829 971 IPR032675 -
Amo09g0085 987 Gene3D Ribonuclease Inhibitor 641 828 IPR032675 -
Amo09g0085 987 Gene3D Ribonuclease Inhibitor 502 640 IPR032675 -
Amo09g0085 987 PRINTS Disease resistance protein signature 923 939 - -
Amo09g0085 987 PRINTS Disease resistance protein signature 328 342 - -
Amo09g0085 987 PRINTS Disease resistance protein signature 178 193 - -
Amo09g0085 987 Coils Coil 31 51 - -
Amo09g0085 987 SUPERFAMILY L domain-like 454 824 - -
Amo09g0085 987 CDD RX-CC_like 2 118 IPR038005 -
Amo09g0085 987 Gene3D - 136 205 IPR027417 -
Amo09g0085 987 Gene3D - 206 288 IPR027417 -
Amo09g0085 987 SUPERFAMILY RNI-like 784 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0085 Amo-Chr9 903328 906372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0085 180 720 WRKY Transcription Factor Family AT5G45050 22.848 1.76e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0085 - - ahf:112709874 1933.69