Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0077 ATGAACAGACAAGGGCAGCGATCCGGTGCTTCGGCGGTGCACCAACCCCGTCACTACTCCGAAAACCTTCTCGAACCTTCCTCCAATGCCAGCTGGCTTCACTCTCACTCTAACATTCACTCCTCTTCCAGTTTCATTCCTCCTCTTCAGGATTATAATTTGTATGGTGGAGGAGGAAGCAGAATGTATAGGAACAGCGTTCAAAGGAGCTTCAGCGGAGGAAGTGATTATTACTATGACGCGGAGGCCTCCGCCCTGCCCAAGAAGAAGTATGGCGAGGAAGTTTCGCCGGCCGATTTCAGCCCAGGCCTCTTGGATATCCATTCATTTGATACTGAGCTTCTTCCTGAGATGCCAGCTTCTGATGTATCCGATGCCACCCTATATCAGCCTACTCTTGGTAGAGGGTTTGATGATGCTGAGCCTTACATGTTGAGTAAGCAGAGTGGCAGAGGTCGCGCACCTGACAACAACTTAATGAGTAATGTTTCTTCTACTGATAAGGAGAAATCCAGCTCTGTCGCAAAGATTAAAGTTGTGGTTCGCAAAAGACCACTTAACAAGAAGGAAATAGCAAAGAATGAGGAAGACATTATAGAGACAATATCGAATTCTTTAACAGTGCATGAGACTAAACTTAAGGTCGACCTAACTCAGTATGTAGAGAAGCATGAATTTGTTTTCGATGCTGTCTTGAACGAGGAGGTTACAAATGATGAGGTATATCGTGAAACAGTGGAGCCCATAGTGCCAATAATTTTTCAACGAACTAAGGCGACTTGTTTTGCATATGGGCAAACAGGAAGTGGGAAAACTTACACAATGAAGCCACTGCCTCTAAAAGCATCAAGGGACATCTTGAGATTGATGCATCATACTTACAAGAATCAGGGATTTCAGTTGTTTGTTAGTTTCTTTGAAATATATGGTGGAAAGCTTTTTGATCTCCTTAATGATCGGAAAAAACTGTGCATGAGAGAGGATGGTAAGCAACAAGTTTGCATTGTTGGCTTGCAAGAGTACCAGGTATCCGATGTAGAGATGATCAAAGAACTGATAGACCAAGGAAATGCCACACGAAGTACTGGCACCACTGGTGCAAACGAGGAATCTTCAAGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAACTGATGGCAATGGGTCGAAGCCTCCTCGTGTTGCTGTTATTGGCAAGCTCTCCTTCATTGATCTTGCGGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAAACAAGAATAGAAGGTGCTGAGATCAATAAAAGCTTACTTGCCCTGAAGGAGTGCATAAGAGCTCTCGATAACGATCAGGGACACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTTTAAGGGATTCCTTTGTTGGTAATTCCCGCACTGTTATGATATCATGCATATCACCAAGCTCTGGTTCATGTGAACATACTCTCAATACATTAAGATATGCTGACAGAGTAAAAAGCCTATCAAAGGGTCACAATTCTAAGAAGGAAACTATATCTTCAATCAACCTCAAGGAATCTATTACAATTCCTGTATCTTCTTTTCCTGCATCTGCCTATGAGGATCATGTGGCTGATGCATCGCTGGAAGATAATGATGTGGATGAATTTAGCCCTCCCGAAGAGTACTATGAAGAGGTGAAACCATCATTAAAGAAATATGGAAAGATAGAGCCGTCGTATGGTGTGACAGAAGACAAATCGAAGAAGCAGAATAATCAGATCAAATGGAAGGACCTCCCAAATGTTGAACCTAAAACTGTACATTCAGACGATGATTTGAATGCCCTCTTAAAGGAGGAGGAAGATCTTGTAAACGCCCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTATGTTACAAAGCTAAATGCCATTCTAACACAGAAAGCTGCTGGTATCTTACAGTTGCAAACCCGTTTAGCACATTTTCAAAAACGTTTGAAGGAGCATAATGTTTTGGTTTCATCTAATGGTTACTAA 2082 0.426 MNRQGQRSGASAVHQPRHYSENLLEPSSNASWLHSHSNIHSSSSFIPPLQDYNLYGGGGSRMYRNSVQRSFSGGSDYYYDAEASALPKKKYGEEVSPADFSPGLLDIHSFDTELLPEMPASDVSDATLYQPTLGRGFDDAEPYMLSKQSGRGRAPDNNLMSNVSSTDKEKSSSVAKIKVVVRKRPLNKKEIAKNEEDIIETISNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYKNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVEMIKELIDQGNATRSTGTTGANEESSRSHAILQLAIKRSTDGNGSKPPRVAVIGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGHNSKKETISSINLKESITIPVSSFPASAYEDHVADASLEDNDVDEFSPPEEYYEEVKPSLKKYGKIEPSYGVTEDKSKKQNNQIKWKDLPNVEPKTVHSDDDLNALLKEEEDLVNAHRKQVEETMNIVREEMNLLVEADQPGNQLDDYVTKLNAILTQKAAGILQLQTRLAHFQKRLKEHNVLVSSNGY* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0077 693 Gene3D Kinesin motor domain 154 504 IPR036961 -
Amo09g0077 693 MobiDBLite consensus disorder prediction 147 167 - -
Amo09g0077 693 ProSiteProfiles Kinesin motor domain profile. 176 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo09g0077 693 Coils Coil 611 642 - -
Amo09g0077 693 PRINTS Kinesin heavy chain signature 256 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo09g0077 693 PRINTS Kinesin heavy chain signature 365 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo09g0077 693 PRINTS Kinesin heavy chain signature 401 419 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo09g0077 693 PRINTS Kinesin heavy chain signature 451 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo09g0077 693 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 693 - -
Amo09g0077 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 501 IPR027417 -
Amo09g0077 693 MobiDBLite consensus disorder prediction 151 167 - -
Amo09g0077 693 PANTHER KINESIN-RELATED PROTEIN 6 1 693 - -
Amo09g0077 693 CDD KISc_KIF2_like 176 499 - -
Amo09g0077 693 ProSitePatterns Kinesin motor domain signature. 400 411 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo09g0077 693 Pfam Kinesin motor domain 182 500 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo09g0077 693 SMART kinesin_4 174 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0077 Amo-Chr9 828737 833599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0077 175 512 Calmodulin-binding Proteins AT5G65930 33.618 2.93e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0077 K10393 - gmx:100799100 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0213 18 3034731 3040302 Amo09g0077 09 828737 833599 hybridization