Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0007 ATGGATGAGACTCAAAGGAAGAAGAAACAAAGGGAACTTGAAGAGAGATTGCTTGCACTTTCAGCCACCATACCCAGTAGTGGCTTCAAGAATAACAAGATGGACGATAGATCAATCCTTGACAATGCTAGCAACTACGTGAAACAACTCCAACAACGTGTGAGGGAGCTAGAACAAGAAGTTGGTGGTGGATCCAACAGTAACAAAGGTTCCACGTCTTATAATAACGAAGAAGTAAACTCTTATAATAGTAACAATAATTGTGATGAATTGTATTATGGAGAAGGTGGTGGCAATAATATTAATCTTCCTGAGGTCAAAGTAAGAGTGTTGCAAAACGAAGTGCTCATCATAATCCATTGCGAGAAACAAAAGGGTTTGATGCTCAAAATTCTAACAAAGCTTGAGAATCTTCATCTTTTGGTTCTCAATAACAGTGTCTTGCCATTTGGGAAGTCAACCCAAGACATAACCATTGTTGCTCAGATGGGAGATAGATACAACATGACAGTGAAGGAATTATGGTCTGTTGACACCGGAGGAGTATCGGAACTGCATTTGGACGTCGTTAGCAAGGGTGAGGAAGGAGGTCGGTCCGGCATTATCATTGGGATATTCAGCTTTACTCTGACTGTCTACCATGGGGGTCGATTCATATATGAAGATGGGACGTTGTGGTATATAGGGGGACAAAAGACACTCATTGAAAATGTTGAGAGTGATTGCTGGTCTGTAATTGAGGCATATGCAGAGTTAAGACAATTTGGGTACACAAAGGAGAACATTTCAGCTCTATGGTATAAGGATCCAGCGATGAATAGTTAG 825 0.4085 MDETQRKKKQRELEERLLALSATIPSSGFKNNKMDDRSILDNASNYVKQLQQRVRELEQEVGGGSNSNKGSTSYNNEEVNSYNSNNNCDELYYGEGGGNNINLPEVKVRVLQNEVLIIIHCEKQKGLMLKILTKLENLHLLVLNNSVLPFGKSTQDITIVAQMGDRYNMTVKELWSVDTGGVSELHLDVVSKGEEGGRSGIIIGIFSFTLTVYHGGRFIYEDGTLWYIGGQKTLIENVESDCWSVIEAYAELRQFGYTKENISALWYKDPAMNS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0007 274 MobiDBLite consensus disorder prediction 58 79 - -
Amo09g0007 274 Gene3D - 3 65 IPR036638 GO:0046983
Amo09g0007 274 PANTHER BHLH TRANSCRIPTION FACTOR 5 174 - -
Amo09g0007 274 MobiDBLite consensus disorder prediction 61 79 - -
Amo09g0007 274 Coils Coil 40 67 - -
Amo09g0007 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 63 IPR036638 GO:0046983
Amo09g0007 274 PANTHER PROTEIN, PUTATIVE-RELATED 5 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0007 Amo-Chr9 70674 75073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0007 7 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.372 1.58e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0007 - - aip:107616596 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0178 19 1929688 1933716 Amo09g0007 09 70674 75073 hybridization
Amo09g0007 09 70674 75073 Amo19g0175 19 1888882 1894087 PCT