Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0005 ATGGAAAATTGGCTCTCTCATTTGGAAATAAGTGGTGGTGGGAGTGGCTCAAGCAGTGTATCATTTGAAGAGATTTTAAGCTTCAATGGTGGTCAATCTTGTGATCATAGCTCCAATAATAAGGATAATAATATTATTATTATTGGTGATGAGGCTAATAAACAAGAGAAGAAGAACTCCAAATGGGGTAGTTTAGGGAATAACAATAATAATAAGAGAACAACAAAGAAGGCAAGAAATTCAATAGAGGCATTGGATCACATAATGTCAGAGAGGAAAAGGAGACAACAAATGGCTGAGAAGTTCATAGCACTTGCAGCTGCTATTCCTGGCTTGAAGAAGGTAACTGTTGTTAATAATTTGCTGTTGAAGTTGGTTGATTTTGGAAAAAGATTTAATATTAGTATTTGGAAAGAGATTATTATGTGGCTTGTGTATTTGAGACTATTTGTTGACCCTCTGTCGCAAGATGTGACCGGGCACTTTAACTCCCCGGATTCCCCCATGTGCATGCATATAAATATGAATATTGAATATTATTGA 543 0.3591 MENWLSHLEISGGGSGSSSVSFEEILSFNGGQSCDHSSNNKDNNIIIIGDEANKQEKKNSKWGSLGNNNNNKRTTKKARNSIEALDHIMSERKRRQQMAEKFIALAAAIPGLKKVTVVNNLLLKLVDFGKRFNISIWKEIIMWLVYLRLFVDPLSQDVTGHFNSPDSPMCMHINMNIEYY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0005 180 MobiDBLite consensus disorder prediction 57 78 - -
Amo09g0005 180 MobiDBLite consensus disorder prediction 59 75 - -
Amo09g0005 180 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 119 - -
Amo09g0005 180 Gene3D - 67 159 IPR036638 GO:0046983
Amo09g0005 180 PANTHER BHLH TRANSCRIPTION FACTOR 1 119 - -
Amo09g0005 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 118 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0005 Amo-Chr9 57553 59930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g0005 67 115 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.939 4.90e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0005 - - ahf:112712745 192.2