Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2555 ATGTTCGGAGAAACAGATCCGATGGGCACAGATAAAGAGATGGAGACGGTGGCCTCTGCTAAAGTCCGACGCATGGACTCTTTCATCAACTTGGAAGCTGGACGTGTTACCATGAGTGAAACACATGGCTCTAAGGTTAGCTGGAGGACTACGTTAAGTTTGGCATTTCAAAGCATAGGGATTGTTTATGGTGATATCGGCACATCTCCGCTTTATGTGTATTCCAGCATTTTTACCAGTGGAATAAAAAACAACGAAGATATTCTTGGCGTCTTATCCCTCATCATCTATACTATTCTGCTCATACCTTTTCTTAAGTATGTCTTTATTGTACTATGGGCGAACGACAACGGCAATGGTGGAGCATTTGCATTGTATTCGCTGATATGCAGACACGTAGAGGTGAGTTTGATTCCAAATCAACAACCAGAGGACAGAAAACTTTCTAACTACAAGCTGGAACTACCGTCTAGTCAGCTCAAACAATCCCAAACACTGAAGCAGATGCTTGAGAACAGTCAGTTTGCTCGTATTCTTCTTTTGCTTGCAACCATTCTGGGAACTTCCATGGTCATAGGAGACGGCTTTCTTACTCCCTCAATGTCAGTCCTTTCTGCCGTAAGTGGGATCAGTAAATCACTCGGTCAAGATGCTACAGTGGGAATCGCTATAGGAATCTTAATTATTCTATTTTCTTTGCAAAGATTCGGTACAGATAAAATGGGATTTTCATTTGTACCAATTATTTTAGTATGGTTTTTACTCATAGGGGGAATTGGTATCTATAATTTGTTCAAATATGATATCGGAGTGTTGCGTGCTTTCAATCCAAAATATATAATTGATTACTTCAAACGCAATGGTAAACAAGGATGGCTATCACTTGGTGGAGTCTTTCTATGCATAACAGGATCTGAAGCCATGTTTGCAGACTTGGGTCACTTTAATGTACGAGCAATTCAAATTAGCTTCACTTTTATTACATGTCCTGCAATATTGTGTGCATATACTGGGCAAGCTGCATTTCTTCGAAAGTTTCCTGAAAAAGTGGGCAATACTTTCTATGAAAGTCTACCAAATGCCATATACTGGCCAACATTTGTGGTGGCTGTTGGTGCTGCTATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCCATCATATCGCAGGCCCTGAGTCTAGGTTGTTTTCCACGAGTTAAGGTTGTGCATACTTCCACTAAGCACGAGGGTCAGGTGTATATTCCTGAGATCAACTACATGTTCATGATTGGAAGCATTATTATGTCATACGGGATTGCAGTTATTGGGGATATGCTTATCACAACGTGGCTGGTTTCATTRATAATGGTAGTTATATGGAAGAAGAGCATATGGCAAGCTACTATCTTCTTATTGGTATTCGGCTGCATAGAGGCTATTTATTTCTCATCTCAGATAACAAAGTTTATGGAAGGAGGCTATATTCCAATTGTGTCTTCTTTGTTCTTGACGATGATCATGGGAATCTGGCATTACGTGCACAAAGAGAGGTACATGTTCGAACTTAGAAATAAAGTTCGCAGTGAGTACATAGGGGAATTGGCCATGGATAGGGACATAAGAAGAGTTCCCGGGGTGGGGTTGCTCTACTCTGAGCTTGTGCAGGGAATTCCTCCGATATTCCCCCATCTCATAGCCTGTATGTCATCCATCCATTCAGTCATTGTCTTTGTTTCTATCAAGGTCATCCCTATCAGTCGAGTTTCTTTGGAGGAGAGGTTTCTATTTTGCCATTTGGAGCCCAGAGAGTATCGAATGTTCCGTTGCATAGTTAGATGCGGTTACAAAGATAAACTCGAAGATGCTCTCGTGTTTGAATCACAGTTAATACAAAATCTCAAGGCCTTCATTCACCTAGATGAACCTGAGGTCAACTTCATCGACATGGCAATGCAAAGAGGTGTGATGTATATGCTTGGTGAAGCAGAGGTGGTGGCTCAACCAAATTCATCGTTCCTCAATAAGATAATTGTCAACTATGCTTACACTTTCTTAAGAAAGAACTTCCGTCAAGGAAACCAATTGATGGCTATTCCGCGTAAGAGACTTCTCAAGATTGGAATGACATATGAAATATAA 2124 0.4087 MFGETDPMGTDKEMETVASAKVRRMDSFINLEAGRVTMSETHGSKVSWRTTLSLAFQSIGIVYGDIGTSPLYVYSSIFTSGIKNNEDILGVLSLIIYTILLIPFLKYVFIVLWANDNGNGGAFALYSLICRHVEVSLIPNQQPEDRKLSNYKLELPSSQLKQSQTLKQMLENSQFARILLLLATILGTSMVIGDGFLTPSMSVLSAVSGISKSLGQDATVGIAIGILIILFSLQRFGTDKMGFSFVPIILVWFLLIGGIGIYNLFKYDIGVLRAFNPKYIIDYFKRNGKQGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFTFITCPAILCAYTGQAAFLRKFPEKVGNTFYESLPNAIYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSTKHEGQVYIPEINYMFMIGSIIMSYGIAVIGDMLITTWLVSLIMVVIWKKSIWQATIFLLVFGCIEAIYFSSQITKFMEGGYIPIVSSLFLTMIMGIWHYVHKERYMFELRNKVRSEYIGELAMDRDIRRVPGVGLLYSELVQGIPPIFPHLIACMSSIHSVIVFVSIKVIPISRVSLEERFLFCHLEPREYRMFRCIVRCGYKDKLEDALVFESQLIQNLKAFIHLDEPEVNFIDMAMQRGVMYMLGEAEVVAQPNSSFLNKIIVNYAYTFLRKNFRQGNQLMAIPRKRLLKIGMTYEI* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2555 707 TIGRFAM kup: potassium uptake protein 54 707 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo08g2555 707 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 636 706 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo08g2555 707 Pfam K+ potassium transporter 55 612 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo08g2555 707 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 634 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo08g2555 707 PANTHER POTASSIUM TRANSPORTER 5 636 706 - -
Amo08g2555 707 PANTHER POTASSIUM TRANSPORTER 5 16 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2555 Amo-Chr8 39605570 39609001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2555 20 707 Inorganic Solute Cotransporters AT4G13420 54.737 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2555 K03549 - gmx:100814313 940.258