Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2539 ATGGGGTGGTTGAGCTCTTACGCCGGTGCAGTCGCACTAGCTCTTGCTCCCACAATTGCTCCTTCTTTTCACTCCACACACACTCTTTTCTTCCAACAATTCCCAAACCATCTCTTCAAATGCCACACCTTTTCAACTCTCTCTCTTACTTATCGCAAGCTGTTGGTGCCCCCTCCGTGCCACGCGCTACGCGCTGCTGCACAACCTTCAAGGGATGATTATGATGATTCTGATTTCGTGGTTGTCAATTTCTACCATTTTGTGTTTATCAAAGATCCTCAAGCTGAAGTCACTAAACACCTTTCGTTCTTGGAGGGTCTCAATCTTGACATCAATGGAAGAGTTTATTTGAATGAACAAGGGATTAATGCGCAGTTTAGTGGACCATCAAAAGATGCACTGAAATATGTCAACTGGTTGAGAGAGGATAAGAGGTTTTCAGATATCCTGGTTCAGATATCTCCATCACAAAATGGACATGCCTTTCCAAAATTGAAGTTGCGGTATAAGCCCTCATTAGTACAGGTTGAAGGTGGCGTATCACATCTTCCTTTGCTTGATCCTTCAATGCGGGCAATACCTTTAGAACCTTCAGAATGGAGAAATAGATTGGAACCAACCAATAAAAATGATCTTACATCAAAAGAATATCTAAAGAGGAATTACATTCTATTGGATGTAAGAAATGGTTATGAGTGGGATATTGGACATTTTAATGGGACCCAACGACCTAATGTGGACTGCTTTAGGAGTACTTCATTTGGTATGTCTCAACAAGAGATCTCTGCATCAGATCCTTTATCAAATGTAGATAAAGAAAACACAAACATATTGATGTATTGCACTGGAGGGATTCGCTGTGATGTATATTCTACAATACTAAGGCAGCAAGGATTTCAGAATTTATATACCTTGAAAGGAGGTGTTTCTCACTATTTAAAGAATGAAGGTCCTGCAAAATGGGTAGGAAACTTATTTGTATTTGACTCTCGTCTCTCGCTCCCTCCGTCTGTGTACTATCCCCAGGCCACAACTGAAGCAGACATGACCCAAATTTCTGGAGTTGATAAGTTTGCAAAATGCTACCTATGTAGTTCAGAAGTCAGCGAATTGAGACATAGGAATTGTGCAAATCTTGACTGTAATTTGCTGTTTTTATGCTGCAGTCAATGTGTAAAGGACCTAAGGGGATGTTGTTGTTTGAGTTGCACTACTGCCCCGCGGCTTAGACCTGTTCTAATCGGAGATTCGAGATACAAGAAGTGGCACATCTATCGCGATATGGATTTGCAACACAGCATGAAAATTTCAGCTTGA 1317 0.4115 MGWLSSYAGAVALALAPTIAPSFHSTHTLFFQQFPNHLFKCHTFSTLSLTYRKLLVPPPCHALRAAAQPSRDDYDDSDFVVVNFYHFVFIKDPQAEVTKHLSFLEGLNLDINGRVYLNEQGINAQFSGPSKDALKYVNWLREDKRFSDILVQISPSQNGHAFPKLKLRYKPSLVQVEGGVSHLPLLDPSMRAIPLEPSEWRNRLEPTNKNDLTSKEYLKRNYILLDVRNGYEWDIGHFNGTQRPNVDCFRSTSFGMSQQEISASDPLSNVDKENTNILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAKWVGNLFVFDSRLSLPPSVYYPQATTEADMTQISGVDKFAKCYLCSSEVSELRHRNCANLDCNLLFLCCSQCVKDLRGCCCLSCTTAPRLRPVLIGDSRYKKWHIYRDMDLQHSMKISA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2539 438 Gene3D - 67 174 - -
Amo08g2539 438 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 217 335 IPR036873 -
Amo08g2539 438 ProSiteProfiles Rhodanese domain profile. 218 321 IPR001763 -
Amo08g2539 438 Pfam Rhodanese-like domain 219 313 IPR001763 -
Amo08g2539 438 SMART rhod_4 207 318 IPR001763 -
Amo08g2539 438 Pfam Rhodanase C-terminal 323 404 IPR022111 -
Amo08g2539 438 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 75 433 - -
Amo08g2539 438 CDD RHOD_YceA 195 314 - -
Amo08g2539 438 Pfam UPF0176 acylphosphatase like domain 80 171 IPR040503 -
Amo08g2539 438 Gene3D - 188 350 IPR036873 -
Amo08g2539 438 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 75 433 IPR020936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2539 Amo-Chr8 39455558 39459194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2539 73 433 Sulfurtransferasese or Rhodanese AT1G17850 67.116 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2539 - - gmx:100814358 660.603