Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2510 ATGGAACAAATACTTTCAACCTATGAGAAAGCACTCACCATGCTCAATAACACCAACTTCATGAAGGATTCTTCTCATTGTTCATCTTCTTCTCTTGCAAATGGCAGCACAAAAAGTGAGGTCTTGGATAAAGAGGATGTTGCAAAGCACAAACAAGTGTCCAAGAAAAGAAAGACTATGTCAATGTGGACAAAGCAAGTGAGGGTGTGTTTGGGAACAGAGCTTGATGGTTCTATGGAAGATGGCCATAGCTGGAGAAAATATGGACAGAAGGACATTCTTGGAGCCAAGTTTCCAAGAGGATATTTCAGATGTACACATAGACATGTACAAGGTTGTTTGGCCACAAAACAAGTGCAAAAATCAGATGAAGATCCAAATGTGTTGGAAATAACCTACAAAGGAAGACACACTTGCATTCAAGTTAGTCATCACTCAAAAAAACCAAACATGGCCTTATTATTAGAAGAACAACCCAAGAATCATCAACCAACACAAAAAGAGATGAAAACAGAACAACCCACCCATGAAACAATTCTCACATTTGGAACATCACAAGAACTTGAAGTCAAACTTGATGACTTTGACTTTGACTTTGACCCTGACACAAAGGAGAACATTTTCTCTTCACTTTGCTTCACTTCCCCATCAATAGTTTCTGAAAATGATGAAGACAACAACAAAATGTTCTCTTACATTGAAAGCTTTTCTCCTGAATTCATATCACCAACAACAAATTCAGAATCAAACAACATTTTCCACTTTAATGATGGACTAGGCCTATGTGTTCAAACCTCAGATTCTGATTTTAGTGATAATGTTTCAGCACCAACTTCATCAGTCTCTAATTCATCAATAGAAGGCTTGGATTTTCACTCCTTTGATGAAAAGGTGGATTTTGATAATTTTTACTCCATAAACTCCTAG 927 0.3711 MEQILSTYEKALTMLNNTNFMKDSSHCSSSSLANGSTKSEVLDKEDVAKHKQVSKKRKTMSMWTKQVRVCLGTELDGSMEDGHSWRKYGQKDILGAKFPRGYFRCTHRHVQGCLATKQVQKSDEDPNVLEITYKGRHTCIQVSHHSKKPNMALLLEEQPKNHQPTQKEMKTEQPTHETILTFGTSQELEVKLDDFDFDFDPDTKENIFSSLCFTSPSIVSENDEDNNKMFSYIESFSPEFISPTTNSESNNIFHFNDGLGLCVQTSDSDFSDNVSAPTSSVSNSSIEGLDFHSFDEKVDFDNFYSINS* 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2510 308 Pfam WRKY DNA -binding domain 80 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo08g2510 308 SMART WRKY_cls 79 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo08g2510 308 ProSiteProfiles WRKY domain profile. 79 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo08g2510 308 Gene3D WRKY domain 56 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo08g2510 308 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 2 302 - -
Amo08g2510 308 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 2 302 IPR044810 GO:0003700
Amo08g2510 308 SUPERFAMILY WRKY DNA-binding domain 78 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo08g2510 Amo-Chr8 39028354 39030698 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2510 2 143 WRKY Transcription Factor Family AT5G24110 47.183 1.79e-40 141
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo08g2510 WRKY 5.4e-26 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2510 - - ahf:112708040 299.671