Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g2510 | ATGGAACAAATACTTTCAACCTATGAGAAAGCACTCACCATGCTCAATAACACCAACTTCATGAAGGATTCTTCTCATTGTTCATCTTCTTCTCTTGCAAATGGCAGCACAAAAAGTGAGGTCTTGGATAAAGAGGATGTTGCAAAGCACAAACAAGTGTCCAAGAAAAGAAAGACTATGTCAATGTGGACAAAGCAAGTGAGGGTGTGTTTGGGAACAGAGCTTGATGGTTCTATGGAAGATGGCCATAGCTGGAGAAAATATGGACAGAAGGACATTCTTGGAGCCAAGTTTCCAAGAGGATATTTCAGATGTACACATAGACATGTACAAGGTTGTTTGGCCACAAAACAAGTGCAAAAATCAGATGAAGATCCAAATGTGTTGGAAATAACCTACAAAGGAAGACACACTTGCATTCAAGTTAGTCATCACTCAAAAAAACCAAACATGGCCTTATTATTAGAAGAACAACCCAAGAATCATCAACCAACACAAAAAGAGATGAAAACAGAACAACCCACCCATGAAACAATTCTCACATTTGGAACATCACAAGAACTTGAAGTCAAACTTGATGACTTTGACTTTGACTTTGACCCTGACACAAAGGAGAACATTTTCTCTTCACTTTGCTTCACTTCCCCATCAATAGTTTCTGAAAATGATGAAGACAACAACAAAATGTTCTCTTACATTGAAAGCTTTTCTCCTGAATTCATATCACCAACAACAAATTCAGAATCAAACAACATTTTCCACTTTAATGATGGACTAGGCCTATGTGTTCAAACCTCAGATTCTGATTTTAGTGATAATGTTTCAGCACCAACTTCATCAGTCTCTAATTCATCAATAGAAGGCTTGGATTTTCACTCCTTTGATGAAAAGGTGGATTTTGATAATTTTTACTCCATAAACTCCTAG | 927 | 0.3711 | MEQILSTYEKALTMLNNTNFMKDSSHCSSSSLANGSTKSEVLDKEDVAKHKQVSKKRKTMSMWTKQVRVCLGTELDGSMEDGHSWRKYGQKDILGAKFPRGYFRCTHRHVQGCLATKQVQKSDEDPNVLEITYKGRHTCIQVSHHSKKPNMALLLEEQPKNHQPTQKEMKTEQPTHETILTFGTSQELEVKLDDFDFDFDPDTKENIFSSLCFTSPSIVSENDEDNNKMFSYIESFSPEFISPTTNSESNNIFHFNDGLGLCVQTSDSDFSDNVSAPTSSVSNSSIEGLDFHSFDEKVDFDNFYSINS* | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g2510 | 308 | Pfam | WRKY DNA -binding domain | 80 | 139 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo08g2510 | 308 | SMART | WRKY_cls | 79 | 141 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo08g2510 | 308 | ProSiteProfiles | WRKY domain profile. | 79 | 137 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo08g2510 | 308 | Gene3D | WRKY domain | 56 | 134 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo08g2510 | 308 | PANTHER | WRKY TRANSCRIPTION FACTOR 46-RELATED | 2 | 302 | - | - | |
Amo08g2510 | 308 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 2 | 302 | IPR044810 | GO:0003700 | |
Amo08g2510 | 308 | SUPERFAMILY | WRKY DNA-binding domain | 78 | 139 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g2510 | Amo-Chr8 | 39028354 | 39030698 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g2510 | 2 | 143 | WRKY Transcription Factor Family | AT5G24110 | 47.183 | 1.79e-40 | 141 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Amo08g2510 | WRKY | 5.4e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g2510 | - | - | ahf:112708040 | 299.671 |