Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2477 ATGGCAGCTGGGAGAGGCGGTGTTTTGAAGAGGGGGGAATCTTACAAATATGGCTCCATTAAGGAATTTGACTGCAAATATTATAATGATGGTTCTTCTATGGTGGAGGCTTCACCTGCCTCTAGTTCTCATGGTGGTGAAGCTTTGCTTCGGGCAGAGAAGAGGAGGAAAGTTTCTCCTAATGCATGGGACATGGGAGAGAGCGAAGTGAGAGTTTCTTCGAAAAACAGGGTCACCCAGGTTGTTGGTCTGCCTCCTACTACTCCATCTCCGGCTGATTCGTCTTTCGTGCTGCCGGGAGAGCAGTCAGGTGATGGTGATACAGATGCGGATTGCTTCGAGGGAAACAAGGTGCAGGGATGGAACATTGCAATGTCGAGGTGGGCTTCTGCTGATTTTTCACCAGTTGATGCATCTTATGATGAGGACAAGGATGGTAAAGTGAGCTTAACAACTGAAAGTGGTGAGATCCTAGAAGGAAGCTCGGGTGGGAAAGTTAGTAGATCAACTGGGAGTAGTGAAAGAGGTAAGTTTGACCTTTCTTCTGATGATGATACTGACACTGAAGAGGATAATATTGTTGATTCCATTGAGGAGGAGGATGAGGAACAAGGTAAAACTGCTTATAGTTTGGTGTCGGATTCTGATGAAAATCTTGGAGGTTCCAGGAAGGTGCAGAGGAATATAAACATGCTCAACAGTTGCAGAAGTGTGTTTGAGTTTGAAATGATTAAGAAGATAAATGAAGGAACTTATGGCATTGTCTACAAAGCTAAGGATAAGAAGACCGGGGAAATAGTTGCATTGAAGAAGGTGAAGATGAACATAGATAAGGAAGGCTTTCCTTTGACATCCTTGAGGGAAATGAACATTCTTTTGTCGTTTAATCACCCGTCCATTGTAGATGTTAAAGAAGTAGTAGTTGATGATTTTGACGGTGTTTTTATGGTAATGGAGTATATGGAGCACGACCTTAAGGGGCTGATGGATGATATGAAGCAGCCTTTTAGTATAGGTGAAATAAAATCGTTGATGTGGCAACTTCTTCAAGGTGTTGACTATCTTCACGATAATTGGGTTCTTCACAGAGATTTGAAGTCTTCAAACATTCTGCTGAACAAAAAAGGAGAACTGAAAATATGTGATTTTGGATTGTCTCGCCAGTATGGGAGCCCACTGAAGCCGTATACGCCTCTTGTGGTTACTCTACGTTACAGAGCACCCGAGCTTTTGTTAGGTTCTAAAGAATACTCCACAGCAATTGACATGTGGTCTGTGGGTTGCATAATGGCTGAATTAGTTGCCAGAGAGCCTCTTTTCAAGGGTAAAAATGAAGTTGAACAACTTGATCAGATTTTTCGAACTCTGGGTACCCCAGATGAGAATATTTGGCCCGGATTACCCAAATTGCCTGGGTCTAAAGCAAAATTTGTGAGGCAACCGTATAATATGCTCCGGAAGAAGTTCCCAGTCGCATCTTTTACTGGTCAGCCAGTTCTATCAGAGTCAGGATTTGACTTGTTGAGCAGGCTTCTAACTTATGACCCTGAAAAGAGGATAACAGCTAAGGATGCTCTCCTTCATGATTGGTTCCATGAAGCCCCTCTTTCTAATTCTGATTTCAAGCCTATTTCCCCTTTTCGTTGCTAG 1650 0.4303 MAAGRGGVLKRGESYKYGSIKEFDCKYYNDGSSMVEASPASSSHGGEALLRAEKRRKVSPNAWDMGESEVRVSSKNRVTQVVGLPPTTPSPADSSFVLPGEQSGDGDTDADCFEGNKVQGWNIAMSRWASADFSPVDASYDEDKDGKVSLTTESGEILEGSSGGKVSRSTGSSERGKFDLSSDDDTDTEEDNIVDSIEEEDEEQGKTAYSLVSDSDENLGGSRKVQRNINMLNSCRSVFEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNIDKEGFPLTSLREMNILLSFNHPSIVDVKEVVVDDFDGVFMVMEYMEHDLKGLMDDMKQPFSIGEIKSLMWQLLQGVDYLHDNWVLHRDLKSSNILLNKKGELKICDFGLSRQYGSPLKPYTPLVVTLRYRAPELLLGSKEYSTAIDMWSVGCIMAELVAREPLFKGKNEVEQLDQIFRTLGTPDENIWPGLPKLPGSKAKFVRQPYNMLRKKFPVASFTGQPVLSESGFDLLSRLLTYDPEKRITAKDALLHDWFHEAPLSNSDFKPISPFRC* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2477 549 ProSiteProfiles Protein kinase domain profile. 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2477 549 MobiDBLite consensus disorder prediction 151 190 - -
Amo08g2477 549 SMART serkin_6 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2477 549 MobiDBLite consensus disorder prediction 154 176 - -
Amo08g2477 549 PANTHER CELL DIVISION PROTEIN KINASE 107 546 - -
Amo08g2477 549 Gene3D Transferase(Phosphotransferase) domain 1 323 543 - -
Amo08g2477 549 CDD STKc_CDC2L1 235 531 IPR045267 GO:0004674|GO:0005524|GO:0006468
Amo08g2477 549 Pfam Protein kinase domain 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2477 549 Gene3D Phosphorylase Kinase; domain 1 223 322 - -
Amo08g2477 549 PANTHER CYCLIN-DEPENDENT KINASE 107 546 - -
Amo08g2477 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Amo08g2477 549 MobiDBLite consensus disorder prediction 34 53 - -
Amo08g2477 549 SUPERFAMILY Protein kinase-like (PK-like) 237 535 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2477 Amo-Chr8 38573706 38578058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2477 236 536 Core Cell Cycle Gene Families AT5G10270 46.057 2.86e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Amo08g2477 Pkinase 1.7e-72 CL0016