Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g2469 | ATGGTTTCAACGAGACGCAACAGTGGATCTCTCTCCGCAAAACGACCTTCTTCTTCTTCCGACGACAAACCTCCTTCTCCTTCTTCTAAACGCCAAAAGGGTGACAGTGGTGGTAGTGGTGGTGCGTCGGAGAAACCGGTGACGGCGGCGGAGGATTCCAAGGAATTGCGTGCTCCAGAGGCCGCTGCCGATCCCGGAGAATGCGGCACTGCTAATGACGCTCAGATCGCCGGCAACGATGGCAAAGCTGATGTCCCGCCAGCCGTACCAGTGGCAGCGCCGATCGCCGATGGGTCTACGCCAAGTTTGGTGGCTGATAAACCAAAGAGTTCGTTCTCTTCGTGGTTTTATCAGAAGCAAAATCCCAACTCTGAGGGTGTTCCCTGGTGCAGGCTCTTATCCCAGTCTTCACAGAATCCGAATGTTCCTATTTCCACATCGAACTTCACAATTGGTTCTAGTAGAAATTCCAACTTCCCGCTGAAGGATCATACTGCAAGTGGAACTTTGTGCAAGATCAAGCAATCCCAGCGTGAGGGGAATGCTGTAGCTGTGCTTGAAAGTACTGGCAGCAAAGGATCTGTGCTAGTAAATGGAACGCTCGTCAAGAAGAGTACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGTTTGCTGGGAAATCATGCTTATGTTTTTCAGCAACTGCATCCTGAAACCGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGGTGGGAAGTTACTGCAGATTGAAAAGAGAACAGGTGACCCTTCAGCCGTAGCTGGGGCTTCTATTTTGGCTTCTTTGTCTAGCTTTAGGCAGGATCTTACAAGATGGAAGTCTCCATCTCAGTCTGCCAGTAAGCCTCACCAGGGTACTGACGTTTCAGAGAGTGAGCTCGATGGCATGGAAGGCAACTCAACTCCAAATGAAGGGACTGACAAAGCCACTGATACTGGAGCAAGCGACAAGAATTCTCCTATGGATTGCGATCCAGATGATGCAGTCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGATTTCCTAAGGCCTTTCTTCCGGGTCCTTGCTGGATCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTGTTGGAAGAAAGAAACGGAGCGAGGGATACACAAGCTGCATCATCTTCGGGTACATCTGTGCGCTGTGCAGTTTTTAAAGAAGATCTTCATGCTGCAATACTGGACGGGAAAAACCTAGATGTGTCCTTTGACAACTTCCCATATTATTTGAGTGAGAATACAAAAAATGTCTTGGTTGCAGCTTGCTTTATACACCTGAAAAATAAGGAACATGTAAAGTACACAACAGATTTTACAACCATAAACCCCCGAGTTCTGCTCTCAGGACCTGCAGGATCAGAAATATATCAGGAAATGTTGGCAAAAGCACTTGCAAAATATTTTGGAGCTAAATTGCTTATATTTGATAGCCATTTACTTCTGGGTGGTTTATCTTCCAAGGAAGCTGAGTTGCTCAAAGAGGGATCCAATGCTGAGAAATCATGCATCTGCACTAAACAAAGTCCTACAGCTACAGATGGGGCTCGTAGTATGGATCCATCAACTAGTGAACCTGATACGCCTAGCTCCTCAAATGCACCTACATTTGGCGTTGAGTCTCAACCTAAGATGGAAATTGATAGCGCACCTTCTACCTCCGGAGCCTCTAAGAGTGGTACATTTAAGCTGGGGGATCGGGTAAAATATAGCTTTTCATCTTCTGGTAGCCTTTATCAGACATCTTCAAGGGGGCCATCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATAACTGATGGAGTTGATCTTGGAGGTGCCTGTGAGGCTGGTCAAGGATTTTTCTGCAACGCAAGTGATCTTCGTTTGGAAAACACTATTGTTGAAGAACTGGACAAATTACTTATTAATACATTGTTTGAGGTTGTGAATAGTGAGAGCCGAAGTACGCCTTTCATTTTGTTCATGAAAGACGCAGAGAAGTCTATAGTAGTTAACGGGGATCCATATTACTTTAAAAGTAAGCTTGAAAAGCTTCCTGACAACGTGGTCGTAATAGGTGCACACACGCACACTGACAGCCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGGAGCAATCAGACTGCGCTACTTGACTTGGCTTTCCCTGATAGTTTTGGAAGATTACATGACAGAGGCAAAGAAGTACCTAAACCAAACAAAACTTTGACTAAGCTTTTCCCAAATAAAGTTACAATTCATATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGACGTTGAGACTCTCAAAATCAAAGGAAATTTGCATCAATTGCGCTCTGTTTTGAGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACCGTGTGCATTAAGGATCAGACACTTACAAATGAAAATGCAGAAAAGATAGTTGGTTGGGCTTTGAGCCATCACCTCATGCAGAATTCTGAAGCTGATCCTGATGCAAAGCTTGTTCTATCTTGTGAGAGCATCCAGTATGGTATTGGGATCTTACAGTCTATCCAAAATGAGTCAAAGAGCCTAAAGAAGTCTCTTAAGGACATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTAGCTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTAGTGATGCTTCCTTTACAAAGGCCTGAGCTCTTTTGCAAGGGGCAATTAACCAAGCCGTGCAAGGGCATCTTATTATTTGGGCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCCATGTCAAGCATCACATCCAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCACCTAGTGTTATATTTGTTGATGAGGTTGATAGCATGTTGGGCCGAAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAAATGAAAAATGAATTTATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTAATGGTAAATTTGCCAGATGCTCCTAATAGAGCAAAGATATTGAAAGTTATTTTGGCAAAAGAGGACTTGTCTTCCGATATTGATTTTGATGCAATCGCAAATATGACCGAGGGGTATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCGCACCGTCCGATTAAAGAGATATTAGAAAAGGAGAAAAAGGAGCATGCTGCTGCTCTGGCAGAGGGTAGACCTGCTCCAGCATTAAGTGGAAGTTCCGATATCAGGTCACTAAACATGGAAGACTTTAAACATGCTCATCAACAGGTATGTGCAAGTGTGTCCTCTGAATCCATAAATATGACCGAGCTTTCGCAATGGAATGATCTATACGGTGAAGGTGGTTCAAGAGTAAAGAAAGCACTTAGTTACTTCATGTGA | 3684 | 0.4425 | MVSTRRNSGSLSAKRPSSSSDDKPPSPSSKRQKGDSGGSGGASEKPVTAAEDSKELRAPEAAADPGECGTANDAQIAGNDGKADVPPAVPVAAPIADGSTPSLVADKPKSSFSSWFYQKQNPNSEGVPWCRLLSQSSQNPNVPISTSNFTIGSSRNSNFPLKDHTASGTLCKIKQSQREGNAVAVLESTGSKGSVLVNGTLVKKSTSCVLNSGDEVVFGLLGNHAYVFQQLHPETAVKGAEVQSGGGKLLQIEKRTGDPSAVAGASILASLSSFRQDLTRWKSPSQSASKPHQGTDVSESELDGMEGNSTPNEGTDKATDTGASDKNSPMDCDPDDAVTEAGNVKISGVNDFLRPFFRVLAGSSCKLKLSKSICKQVLEERNGARDTQAASSSGTSVRCAVFKEDLHAAILDGKNLDVSFDNFPYYLSENTKNVLVAACFIHLKNKEHVKYTTDFTTINPRVLLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKEGSNAEKSCICTKQSPTATDGARSMDPSTSEPDTPSSSNAPTFGVESQPKMEIDSAPSTSGASKSGTFKLGDRVKYSFSSSGSLYQTSSRGPSNGSRGKVVLLFDDNPLSKIGVRFDKPITDGVDLGGACEAGQGFFCNASDLRLENTIVEELDKLLINTLFEVVNSESRSTPFILFMKDAEKSIVVNGDPYYFKSKLEKLPDNVVVIGAHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRSVLSRCGMECEGLETVCIKDQTLTNENAEKIVGWALSHHLMQNSEADPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDIDFDAIANMTEGYSGSDLKNLCVTAAHRPIKEILEKEKKEHAAALAEGRPAPALSGSSDIRSLNMEDFKHAHQQVCASVSSESINMTELSQWNDLYGEGGSRVKKALSYFM* | 1228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 280 | 337 | - | - | |
Amo08g2469 | 1227 | CDD | AAA | 961 | 1094 | - | - | |
Amo08g2469 | 1227 | SUPERFAMILY | SMAD/FHA domain | 128 | 227 | IPR008984 | GO:0005515 | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 302 | 326 | - | - | |
Amo08g2469 | 1227 | Gene3D | - | 128 | 237 | - | - | |
Amo08g2469 | 1227 | ProSitePatterns | AAA-protein family signature. | 1066 | 1085 | IPR003960 | GO:0005524|GO:0016887 | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 524 | 576 | - | - | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 1 | 102 | - | - | |
Amo08g2469 | 1227 | Pfam | ATPase family associated with various cellular activities (AAA) | 963 | 1092 | IPR003959 | GO:0005524|GO:0016887 | |
Amo08g2469 | 1227 | Coils | Coil | 883 | 903 | - | - | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 280 | 295 | - | - | |
Amo08g2469 | 1227 | Gene3D | - | 921 | 1202 | IPR027417 | - | |
Amo08g2469 | 1227 | SMART | AAA_5 | 959 | 1096 | IPR003593 | - | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Amo08g2469 | 1227 | Pfam | FHA domain | 150 | 219 | IPR000253 | GO:0005515 | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 562 | 576 | - | - | |
Amo08g2469 | 1227 | MobiDBLite | consensus disorder prediction | 524 | 555 | - | - | |
Amo08g2469 | 1227 | PANTHER | ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 | 376 | 1227 | - | - | |
Amo08g2469 | 1227 | PANTHER | ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 | 81 | 351 | - | - | |
Amo08g2469 | 1227 | CDD | FHA | 129 | 229 | IPR000253 | GO:0005515 | |
Amo08g2469 | 1227 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 376 | 1227 | - | - | |
Amo08g2469 | 1227 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 81 | 351 | - | - | |
Amo08g2469 | 1227 | Pfam | AAA+ lid domain | 1116 | 1154 | IPR041569 | - | |
Amo08g2469 | 1227 | Gene3D | - | 1095 | 1189 | - | - | |
Amo08g2469 | 1227 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 922 | 1203 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g2469 | Amo-Chr8 | 38490605 | 38503652 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g2469 | 922 | 1171 | Calmodulin-binding Proteins | AT3G56690 | 40.467 | 2.39e-42 | 167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g2469 | - | - | gmx:100780098 | 1962.19 |