Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2467 ATGGAGGGTTTGCTTGCCCACATCTTATCCACTAGTGAAGCTAATAGAAGGAATGCTAATAAAGTGGTTCTGTATAAGGATGCAGCAAAGAAACAACTGCTGGAGTTTATTTCTGCTCTTCGTGGTTGTGAACTAATGTCACAAGCATGCTCTTCTCTTGGCCCTGTACCTTCTAGGCGCTCATCAAAGAGGAACAGAGCAGCAAAAAGAAGAAGGAGTAGGATCAATGAAAAAATGAAGGCCTTGCAACATCTAAGTCCTAATTCTATCAAGATATACAAGCTTGAATTGGAGCAAAAGAGATTAGAGGGGGATGCTTTTATGCTTGAAATTGGGTCTTGTATGGACAATGCGAAATCCCGTGAACTGATAGAGAACAGAGACGACGAATTTGCTGACATTTCTTTTGAAGAATTATTAGCACAAGAAAAGAAGGATTCATTC 444 0.4009 MEGLLAHILSTSEANRRNANKVVLYKDAAKKQLLEFISALRGCELMSQACSSLGPVPSRRSSKRNRAAKRRRSRINEKMKALQHLSPNSIKIYKLELEQKRLEGDAFMLEIGSCMDNAKSRELIENRDDEFADISFEELLAQEKKDSF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2467 148 Coils Coil 65 85 - -
Amo08g2467 148 MobiDBLite consensus disorder prediction 62 77 - -
Amo08g2467 148 Gene3D - 56 123 IPR036638 GO:0046983
Amo08g2467 148 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 108 IPR011598 GO:0046983
Amo08g2467 148 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2467 Amo-Chr8 38474105 38475588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2467 59 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 53.333 9.93e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2467 K08737 - vvi:100255608 87.4261