Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2461 ATGGCGGCAACAACCACCACTGATGGCGGAGGAGGCGGCGGAGCTGGAGGCGGAGGAGGAGAGGATAGGGTTCTTGCGACCGCACAGCAGATCCTCAAGAGCCTGAACACTCCCAAAGATGTTCGTGAAGACATGCTCCTCATCTTCTCCAGCTTCGACAACCGTCTCTCTAACATCACCGATATTGTCCACCGCGACGACGACGGTGCCGCTGCCATCGCCGCCGAGGAGCTTGAACGATTCGAGGCTGCTGAGAAGCTCATCCTCCGCTGGGACTCTTCCCTCTCCAGCGACCCCCACTCCGCCTCATCGCTCCTCCTCGATTCCGCCGATGATGCGGCCGATTACTTCTCCGCAGTCGATGACGTCATCCACTGGATGGAACAGCTCAACCTTGCCCCTCCTCCTCCGCCGTCTTCCTCCGCCGGTAACCGCCACCGGATTGAGATGGACCGCGCCGAGAACGCGATCCAGCTCGCTATGACGCGCCTCGAGGACGAGCTCCGCCACCTCCTCGTCAGGAACACCGTTCCTCTTGACGCGGAGAGCCTCCACGGTTCCATCCGCCGTGTCTCCCTCTCCTTCACTGACGGCGGCACCGTCGACGAAAATCTCGAGAGCTTCGGTGAGGTCAACGACCAAGGCGGCGACTCCCAGCGGTTCCACGAGCGCGGCGCCAGCCTCGGCGACGACATCTCTGTCGATCTCCTCCGCGCTGACGCGGTGGCGGAACTTAGAGAAATCGCTGATCGCATGGTTAGGTCAGGTTACGAGAAAGAGTGCCTTCAGGTATATAGTAGTGTTCGTCGTGATGTTTTGGATGAATATTTATCAATTCTTGGTGTTGAGAAATTGAGCATTGAAGAGGTTCAAAGAGTTGAATGGAAGAGTTTAGATGAAAAAATGAAGAAATGGATTCAGGCTGTTAAGATTTCTGTTAGGGTTCTTCTCACTGGAGAGAAGAGGATTTGTGATAGCGTTTTTGGTGAATTAGATGAGATTAGAGAGATCTGTTTCAATGAGACTGCCAAAGGTTGTGTTATGCAGTTGCTGAATTTCGGTGAGGCCGTCGCAATTTGCAAGCGGTCGCCGGAGAAATTGTTTAGGATCTTGGACATGTATGAGGCATTGAAGGATGCCCTGCCTGAACTTGAGAATATGATCACTGATGGGTTTGTGATTGATGAGGCCAATGGGGTGTTGAAGATGCTTGGTGAGGCTGTTAAGGGGACTTTTGCTGAGTTTGAGAATTGTCTTAGAAATGAGAGTTCTAAGAAGCCGGTTATAACCGGGGACGTTCATCCATTGCCCCGGTATGTGATGAATTACTTGAAGTTGCTTGTGGATTATGGTGAGCCTATGGACTCGCTTTTAGTGATTAGCGACGAGGATCTTATCCGGTTACAAGATAGTTTTGGCGGCAATAGCTCTCAGACAGAGAACATCTCACCCTTGGGGTGCCGAATGGTATTGTTGATTTCAGAGCTTGAGAGTAACCTTGAGGAGAAATCTAAGCTTTATGAAGATAGCGCGTTACAATGTATATTTTTGATGAATAACATCCATTACCTGGTGAGAAAGGTGAAGGGACCGGATCCTCGGAAGGACTCAGATCTTCGGAAGTACTCGGATCTTCAGAATGTCTTGGGAGACGATTGGGTTCGCAAGCGGCGCGGTCAGGTGCGCCAGTATGCGACGGGATACCTGAGAGCCTCTTGGACCAAGGCTTTGTCCTGTTTGAAGGATGAAGGGATTGGAGGAAGCTCTAACAATGCATCAAAGATGGCTTTGAAGGAGAGGTTCAAGAACTTCAATGCATGCTTTGAGGAAATATATAGGATTCAGACGGCGTGGAAGGTACCGGACCCACAACTCCGGGAAGAACTCAGAATCTCTATATCAGAGAAGGTGATTCCGGCATACCGGTCATTCGTGGGGCGGTTTCGGAGTCAGCTCGAGGGAAGACATGCCGGGAAGTACATTAAATATACACCAGAGGACTTGGAGGCCTATTTATCGGATTTGTTTGAAGGATCACCTGCTGTATTGCACCATATAAGGAGGAAGAGTCAATAG 2076 0.5111 MAATTTTDGGGGGGAGGGGGEDRVLATAQQILKSLNTPKDVREDMLLIFSSFDNRLSNITDIVHRDDDGAAAIAAEELERFEAAEKLILRWDSSLSSDPHSASSLLLDSADDAADYFSAVDDVIHWMEQLNLAPPPPPSSSAGNRHRIEMDRAENAIQLAMTRLEDELRHLLVRNTVPLDAESLHGSIRRVSLSFTDGGTVDENLESFGEVNDQGGDSQRFHERGASLGDDISVDLLRADAVAELREIADRMVRSGYEKECLQVYSSVRRDVLDEYLSILGVEKLSIEEVQRVEWKSLDEKMKKWIQAVKISVRVLLTGEKRICDSVFGELDEIREICFNETAKGCVMQLLNFGEAVAICKRSPEKLFRILDMYEALKDALPELENMITDGFVIDEANGVLKMLGEAVKGTFAEFENCLRNESSKKPVITGDVHPLPRYVMNYLKLLVDYGEPMDSLLVISDEDLIRLQDSFGGNSSQTENISPLGCRMVLLISELESNLEEKSKLYEDSALQCIFLMNNIHYLVRKVKGPDPRKDSDLRKYSDLQNVLGDDWVRKRRGQVRQYATGYLRASWTKALSCLKDEGIGGSSNNASKMALKERFKNFNACFEEIYRIQTAWKVPDPQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLEAYLSDLFEGSPAVLHHIRRKSQ* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2461 691 SUPERFAMILY Cullin repeat-like 80 677 IPR016159 -
Amo08g2461 691 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 63 690 - -
Amo08g2461 691 Coils Coil 150 170 - -
Amo08g2461 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 690 IPR004140 GO:0000145|GO:0006887
Amo08g2461 691 MobiDBLite consensus disorder prediction 1 22 - -
Amo08g2461 691 Pfam Exo70 exocyst complex subunit 303 674 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo08g2461 691 Gene3D Exocyst complex component Exo70 100 683 - -
Amo08g2461 691 Coils Coil 493 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2461 Amo-Chr8 38431330 38433887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2461 22 690 EXO70 exocyst subunit family AT5G50380 60.576 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2461 K07195 - gmx:100818693 933.71