Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2448 ATGGAATGTAATAAAGATGACGCCATAAAGGCTAAAGAGCTTGCCGAGAAGACGCTACTTGAGAGGGACCTAAGCAGTGCAAAGATATTTGCAAAGAAGGCGCAAGACATGTATCCTAATCTTGATGGCCTTCGTCAATTGCTGGCCACTATTGAGGTGTATGCTTCGGCTGAAAAAAAGGTTAATGGTGAAGTTGATTGGTACAGGGTCCTTGGTGTTGAACCAATGGCAGATGATCAAACAATTCGAAGACATTACAGGAAACTGGCTCTTATTCTGCACCCTGATAAAAATAAATCGGTAGGGGCAGACGGGGCATTTGATCTTATCACACAGGCATGGACTTGTTTGTCTGATAATGCCAAGAGAGTCGAGCATGACCAAAAGCGCAACTTCTCTGGCATATATTGTGGGAAACCGTCTGCACCAGCTCGTCAGAGTGGTTTCTTTGGTAACTTAAATGCTGCTAACTGGAAGAATAGAGATCAAGGGAGTGCTACACATCAAACTCAAACTACAAGACCTCCCACGTCGATGAACCCGACATTTTGGACCATGTGCTTGTCCTGCAGGACAAAGTTTGAGTACAATGCTCATTTTGTCAACTGCAGACTTACCTGCGTCAACTGCAACAAGACCTTTGTAGCTTCTGAGGCATCGCCCCCACGTGTATATAGAAATGCTTCATCTACTTCAAGCATTTCTCAGATGAACCAAAATAACCTTAACAGAATGGGAGCAAACTGTCATGTTTCAGGAAAGGTACCAATTCCTGCTGTCAACTCATCATTCGGGTCAGGTTCTCTCTTCATGCCTGGTGGCGTTTCGAGAATGCCGTCATTTTCTGCTGCTGCTGAAACTCCTGGTGTTTTCAAAGTTCCATCTGATACTTTGAAGAGGGCATGTGAAGCTTCAACACCCGACAATGCCCTTGCTGCTGAGTTTACTGGTGTTGCAGGTTCAACATTTCATTCCTGTTCATTTGGTTCAAATTCTTCTCTGAAAGGAGATGGGCCAAGGAAAAAAATCCGCATAAGTGAATTCAAAGTAAACAGTGATAGGAAATATACACAAAATGGGGTAGCTTCTCGACACGAAGGAGTAAGCTTGGCAAACGAACTTGGGTCTGAAAAGTATAATTCTGAAACCGGAAGGATGAGTGCTGCTGGAAACTACAAACGTAATGTTTTTTGGGAAATACCACAACAGAAAATGAAGAAGATTCTAATGGAGAAGGCGAGAAAGGAAATTCAGAAAAAGCTTGAAGAATGGAATGTTGCTTCTGAAACAAGGAATTTGGAAAAGTCAAAGGATGCTGCTACAGAGATCATAGAGAAGGACAAGAAAAAGGCCAAAGATGGCATAGAGAAGGAGAACAAAAAGATTTCATATGCTGTAAAACCTGTCGTGAAAAATGCTATTCATGGTGCAAAACCTGGTGCACAAGAAATTGTTGCTTCTGATAAAATTGGCAAAAAGCATATCCCTCCTGCTGATCCAGTTGTGGCTGATTATACAGTCTTGATGAGTGTTCCAGACCCGGACTTCCATGATTTCGACGGGGCCGTGTGGGCTGTTTATGATGAGGACGATGGCATGCCACGCTACTATGCTTTGATTCACGATGTGATCTCAAAGAAACCGTTCAACATGAGAATTAGCTGGCTTAACTCGAAGACAAACGATGAATTGGCTCCAATAAAGTGGGTTAGTTCTGGCTTTCCCAAGACCTCTGGGGATTTCAGAATAAGCAAGCGTGCTGTCTATAACAGTCTTAACTCCTTTTCGCACAAGGTTCAATGGACGAAAGGTGCAAGAGGAATTGTGCATATATATCCCAAGAAGGGGGATGTTTGGGCCTTGTACCGGAACTGGTCTGCTGACTGGAACCAATTTACCAAAGACGAAGTCATTCATAAGTATGACATGGTGGAAGTGCTGGAAGACTACAATGAGAAGCAAGGTGTGAATGTTGCTCCGCTTGGTAAAGTTCAGGGTTTCAAGACAGTGTTTTGCCGGAACAGGGATCCAAGGAGAATAAAAAACATTCCAAAGGCAGAGATGTTTCGCCTCTCGCACCAAGTACCTGCGTACTTGCTCACTGGTCAAGAAGGCCATAATGCTCCTAGAGGCTGCTTGGAGCTTGATCCAGCCGCCACACCTATGGAACTTCTTCAAGTAGTCACAGAAATACCCGAGCAAGAATCGGTAGATGAATTTCAGAGCAAAGAGAATCCCGGGCGTGATGAGAAGAGTCGAAAAATTAAGCAAGAAGATTCTGCTCAGGAAATTCCAAGAAAGGAAGGGGCTGAAGAGAAGACATCTAAGGGAAAAGAGAGCAATGTA 2346 0.4373 MECNKDDAIKAKELAEKTLLERDLSSAKIFAKKAQDMYPNLDGLRQLLATIEVYASAEKKVNGEVDWYRVLGVEPMADDQTIRRHYRKLALILHPDKNKSVGADGAFDLITQAWTCLSDNAKRVEHDQKRNFSGIYCGKPSAPARQSGFFGNLNAANWKNRDQGSATHQTQTTRPPTSMNPTFWTMCLSCRTKFEYNAHFVNCRLTCVNCNKTFVASEASPPRVYRNASSTSSISQMNQNNLNRMGANCHVSGKVPIPAVNSSFGSGSLFMPGGVSRMPSFSAAAETPGVFKVPSDTLKRACEASTPDNALAAEFTGVAGSTFHSCSFGSNSSLKGDGPRKKIRISEFKVNSDRKYTQNGVASRHEGVSLANELGSEKYNSETGRMSAAGNYKRNVFWEIPQQKMKKILMEKARKEIQKKLEEWNVASETRNLEKSKDAATEIIEKDKKKAKDGIEKENKKISYAVKPVVKNAIHGAKPGAQEIVASDKIGKKHIPPADPVVADYTVLMSVPDPDFHDFDGAVWAVYDEDDGMPRYYALIHDVISKKPFNMRISWLNSKTNDELAPIKWVSSGFPKTSGDFRISKRAVYNSLNSFSHKVQWTKGARGIVHIYPKKGDVWALYRNWSADWNQFTKDEVIHKYDMVEVLEDYNEKQGVNVAPLGKVQGFKTVFCRNRDPRRIKNIPKAEMFRLSHQVPAYLLTGQEGHNAPRGCLELDPAATPMELLQVVTEIPEQESVDEFQSKENPGRDEKSRKIKQEDSAQEIPRKEGAEEKTSKGKESNV 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2448 782 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Amo08g2448 782 SUPERFAMILY Chaperone J-domain 41 123 IPR036869 -
Amo08g2448 782 CDD DnaJ 66 119 IPR001623 -
Amo08g2448 782 Pfam DnaJ domain 66 127 IPR001623 -
Amo08g2448 782 SMART dnaj_3 65 122 IPR001623 -
Amo08g2448 782 MobiDBLite consensus disorder prediction 731 782 - -
Amo08g2448 782 PANTHER BNAC03G44070D PROTEIN 1 737 - -
Amo08g2448 782 Gene3D DnaJ domain 52 136 IPR036869 -
Amo08g2448 782 Pfam Domain of unknown function (DUF3444) 509 704 IPR024593 -
Amo08g2448 782 MobiDBLite consensus disorder prediction 736 782 - -
Amo08g2448 782 PANTHER HEAT SHOCK PROTEIN-LIKE 1 737 - -
Amo08g2448 782 PRINTS DnaJ domain signature 102 122 IPR001623 -
Amo08g2448 782 PRINTS DnaJ domain signature 68 86 IPR001623 -
Amo08g2448 782 PRINTS DnaJ domain signature 86 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2448 Amo-Chr8 38284724 38287145 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2448 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.878 2.31e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2448 - - ahf:112772645 1481.08