Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2445 ATGGAATGTAATAAAGACGACGCCATAAAGGCTAAAGAGCTTGCCGAGAAGACGCTACTTGAGAGGGACCTAAGCAGTGCAAAGATATTTGCAAAGAAGGCGCAAGACATGTATCCTAATCTTGATGGCCTTCGTCAATTGCTGGCCACTATTGAGGTGTATGCTTCGGCTGAAAAAAAGGTTAATGGTGAAGTTGATTGGTACAGGGTCCTTGGTGTTGAACCAATGGCAGATGACCAAACAATTCGAAGACATTACAGGAAACTGGCTCTTATTCTGCACCCTGATAAAAATAAATCGGTAGGGGCAGACGAGGCATTTAATCTTATCACACAGGCATGGACTTGTTTGTCTGATAATGCCAAGAGAGTCGAGTATGACCAAAAGCGCAACTTCTCTGGCATATATTGTGGGAAACCATCTGCACCAGCTCGTCCGAGTGGTTTCTTTGGTAACTTAAATGCTGCTAACTGGAAGAATAGAGATCAAGGGAGTGCTACACATCAAACTCAAACTACAAGACCTCCCACGTCAATGAACCCGACATTTTGGACCATGTGCTTGTCCTGCAGGACAAAGTTTGAGTACAATGCTCATTTTGTCAACTGCAAACTTACCTGCTTCAACTGCAACAAGACCTTTGTAGCTTCTGAGGCATCGCCCCCACGTGTATATAGAAATGCTTCATCTACTTCAAGCATTTCTCAGATGAACCAAAATAACCTTAACAGAATGAGAGCAAACTGTTCTCTCTTCATGCCTGGTGGCATTTCGAGAATGCCGTCATTTTCTACTGCTGCTGAAACTCCTGGTGTTTTCAAAGTTCCATCTGATACTTTGAAGAGGGCATGCGAAGCTTCAACACCCGACAATGCCCTTGCTGCTGAGAAAACTGGTGTTGCAGGTTCAACATTTCATTCCTGTTCATTTGGTTCAAATTCTTCTCTGAAAGGAGATGGGCCAAGGAAAAAAATCCGCACAAGTGAATTCAAAGTAAACAGTGATAGGAAATATACACAAAATGGGGTAGCTTCTCGACACGAAGGAGTAAGCTTGGCAAATGAACTTGGGTCTGAAAAGGATAATTCTGAAACCGGAAGGATGAGTGCTGCTGGAAACTACAAACGTAATGTTTTTTGGGAAATACCACAACAGAAAATGAAGAAGATTCTAATGGAGAAGGCGAGAAAGGAAATTCAGAAAAAGCTTGAAGAATGGAATGTTGCTTCTGAAGCAAGGAATTTGGAAAAGTCAAAGTATGCTGCTACAGAGATCATAGAGAAGGACAAGAAAAAGGCGAAAGATGTCATAGAGAAGGAGAACAAAAAGATTACATATGCTGTAAAACCTGACACGAAAAATGCTATTCGTGGTGCAAAACCTGGTGCACAAGGAATTGTTGCTTCTGATAAAATTGGCAAAAAACATATCCCTCCTGCTGATCCAGTTGTGGCTGATTATACAGTCTTGATGAGTGTTCCAGACCCGGACTTCCATGATTTCGATGGGGACCGTATTGAAAATGCTTTTGGCGCAAACCAGGTGTGGGCTGTTTATGATGAGGACGATGGCATGCCACGCTACTATGCTTTGATTCACGATGTGATCTCAAAGAAACCGTTCAACATGAGAATTAGCTGGCTTAACTCGAAGACAAACGATGAATTGGCTCCAATAGAGTGGGTTAGTTCTGGCTTTCCCAAGACCTCTGGGGATTTCAGAATAAGCAAGCATGTTGTCTATAACAGTCTTAACTCCTTTTCGCACAAGGTTCAATGGACAAAAGGTGCAAGAGGGATTGTGCATATATATCCCAAGAAGGGGGATGTTTGGGCCTTGTATCGGAACTGGTCTGCTGACTGGAACCAATTTACCAAAGACGAAGTCATTCATAAGTATGACATGGTGGAAGTGCTGGAAGACTACAATGAGAAGCAAGGTGTGAATGTTGCTCCACTTGGTAAAGTTCAGGGTTTCAAGACAGTGTTTTGCCGGAACAGGGATCCAAGGAGAATAAAAAACATTCCAAAGGCAGAGATGTTTCGCCTCTCGCACCAAGTACCTGCGTACTTGCTCACTGGTCAAGAAGGCCATAATGCTCCTAGAGGCTGCTTGGAGCTTGATCCAGCCGCCACACCTATGGAACTTCTTCAAGTAGTCACAGAAATACCCGAGCAAGAATCGGTAGATGAATTTCAGAGCAAAGAGAATCCCGGGCGTGATGAGAAGAGTCGAAAAATTAAGCAAGATTCTGCTCAGGAAATTCCAAGAAAGGAAGGGGCTGAAGCAATTGGAAAGAAAGATGGTAAGCCTGATATTTTGTATGTATATAGGAGAAGACATCTAAGGGAAAAGAGAGCAATGTAG 2367 0.4305 MECNKDDAIKAKELAEKTLLERDLSSAKIFAKKAQDMYPNLDGLRQLLATIEVYASAEKKVNGEVDWYRVLGVEPMADDQTIRRHYRKLALILHPDKNKSVGADEAFNLITQAWTCLSDNAKRVEYDQKRNFSGIYCGKPSAPARPSGFFGNLNAANWKNRDQGSATHQTQTTRPPTSMNPTFWTMCLSCRTKFEYNAHFVNCKLTCFNCNKTFVASEASPPRVYRNASSTSSISQMNQNNLNRMRANCSLFMPGGISRMPSFSTAAETPGVFKVPSDTLKRACEASTPDNALAAEKTGVAGSTFHSCSFGSNSSLKGDGPRKKIRTSEFKVNSDRKYTQNGVASRHEGVSLANELGSEKDNSETGRMSAAGNYKRNVFWEIPQQKMKKILMEKARKEIQKKLEEWNVASEARNLEKSKYAATEIIEKDKKKAKDVIEKENKKITYAVKPDTKNAIRGAKPGAQGIVASDKIGKKHIPPADPVVADYTVLMSVPDPDFHDFDGDRIENAFGANQVWAVYDEDDGMPRYYALIHDVISKKPFNMRISWLNSKTNDELAPIEWVSSGFPKTSGDFRISKHVVYNSLNSFSHKVQWTKGARGIVHIYPKKGDVWALYRNWSADWNQFTKDEVIHKYDMVEVLEDYNEKQGVNVAPLGKVQGFKTVFCRNRDPRRIKNIPKAEMFRLSHQVPAYLLTGQEGHNAPRGCLELDPAATPMELLQVVTEIPEQESVDEFQSKENPGRDEKSRKIKQDSAQEIPRKEGAEAIGKKDGKPDILYVYRRRHLREKRAM* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2445 788 PRINTS DnaJ domain signature 68 86 IPR001623 -
Amo08g2445 788 PRINTS DnaJ domain signature 102 122 IPR001623 -
Amo08g2445 788 PRINTS DnaJ domain signature 86 101 IPR001623 -
Amo08g2445 788 Pfam DnaJ domain 66 127 IPR001623 -
Amo08g2445 788 Pfam Domain of unknown function (DUF3444) 491 696 IPR024593 -
Amo08g2445 788 MobiDBLite consensus disorder prediction 334 368 - -
Amo08g2445 788 MobiDBLite consensus disorder prediction 728 766 - -
Amo08g2445 788 PANTHER BNAC03G44070D PROTEIN 1 729 - -
Amo08g2445 788 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Amo08g2445 788 CDD DnaJ 66 119 IPR001623 -
Amo08g2445 788 PANTHER HEAT SHOCK PROTEIN-LIKE 1 729 - -
Amo08g2445 788 Gene3D DnaJ domain 52 136 IPR036869 -
Amo08g2445 788 SUPERFAMILY Chaperone J-domain 41 126 IPR036869 -
Amo08g2445 788 SMART dnaj_3 65 122 IPR001623 -
Amo08g2445 788 MobiDBLite consensus disorder prediction 727 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2445 Amo-Chr8 38211787 38214382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2445 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.131 1.52e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2445 - - ahf:112772645 1577.38