Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2414 ATGGAAAATGGGCATGGCTCAAAATTTGAACTTGTTGTAAGGCAAATAGGAGAACCAACAAAAGTGAAGCCTTCAGAAGAAACACAAAAGGGACTCTATTTCCTTTCAAACCTTGACCAGAACATTGCTGTTCCAGTTAAAACAGTTTATTGCTTCAAATCAAGTTCAAGGGGGAATGAAGAAGCTCCACAAGTAATCAAAGATTCACTCTCAAAGATTCTTGTCCCTTATTACCCCATGGCAGGTACCTTGATTCTAAGCAAAGAAGGGAAGCTTATAGTGGATTGCACTGAAGAGGGTGCAGTGTTTGTTGAGGCTGAAGCAGAGTGTAACATTGAAGACATTGGAGATTTAACAAAACCAGATCCTCATAATCTTGGCAAACTTGTTTATAGTGTTCCTGGTGCAACCAATATTCTTGAGATGCCTCTTATGACTGCTCAGGTGACAAAGTTCAAATGTGGAGGATTCAGTTTGGGACTAAACATGATCCATTGCATGAAAGATGGAATATGTGCCATGGAATTTGTGAATGCATGGAGCAATGTAGCCAGAGGCTTGAGCTTGAAGGTTCCTCCATATCTCGACCGATCGATGCTCAGAGCGCGCGACCCTCCCAAGATTGAATTCGAACACACAGAATTTGAGCAGATAGAAGATGTATCAAACACTAACAAGCTTTATGAAGAAGAGATGATCTACAAATCATTCACCTTTGACCCTCACAAGCTTGAACACCTCAAGAAAATGGCTACCCAAGATGGGGTTTTGAAGAAATGCACAAGTTTTGAAGCACTATCAGGATTTGTATGGAGGGCTAGATCTGAAGCCTTAAGAATGAAACCTGATCAAAAGACTAAACTACTCTTTGCAGTTGATGGAAGGTCCAAATTTGTGCCACCAATACCTGAGGGGTACTTTGGGAATGCTATTGTTCTAACAAACTCTCTTTGTAAGGCTGGTGAATTACTGAATAGCCCTTTGTCATATTCAGTGAGTTTGGTTCATGAAGCAATTGAAATGGTGAATGATAGTTACATGAGATCAGCCATTGATTATTTTGAAGTCACAAGAGCAAGGCCTTCTTTGGCAGCTACATTATTGATCACAACTTGGACAAAGTTGTCATTTCACACTACAAATTTTGGTTGGGGTGATCCTTTGTGTTCCGGTCCTGTTACTTTGCCTGAAAGAGAAGTTGTTTTGTTCTTGTCTCATGGCCATGGAAGGAGAAGTATTAATGTTCTTTTGGGTTTGCCTGCTTCTGCCATGAACACCTTTCAGGAATTGGTTAACCAAGAATATTACCAAACAACTAATTATTTATTTTTATAA 1335 0.3985 MENGHGSKFELVVRQIGEPTKVKPSEETQKGLYFLSNLDQNIAVPVKTVYCFKSSSRGNEEAPQVIKDSLSKILVPYYPMAGTLILSKEGKLIVDCTEEGAVFVEAEAECNIEDIGDLTKPDPHNLGKLVYSVPGATNILEMPLMTAQVTKFKCGGFSLGLNMIHCMKDGICAMEFVNAWSNVARGLSLKVPPYLDRSMLRARDPPKIEFEHTEFEQIEDVSNTNKLYEEEMIYKSFTFDPHKLEHLKKMATQDGVLKKCTSFEALSGFVWRARSEALRMKPDQKTKLLFAVDGRSKFVPPIPEGYFGNAIVLTNSLCKAGELLNSPLSYSVSLVHEAIEMVNDSYMRSAIDYFEVTRARPSLAATLLITTWTKLSFHTTNFGWGDPLCSGPVTLPEREVVLFLSHGHGRRSINVLLGLPASAMNTFQELVNQEYYQTTNYLFL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2414 444 Gene3D - 15 215 IPR023213 -
Amo08g2414 444 Gene3D - 216 433 IPR023213 -
Amo08g2414 444 Pfam Transferase family 20 429 - -
Amo08g2414 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 431 - -
Amo08g2414 444 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 14 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2414 Amo-Chr8 37916726 37923552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2414 15 431 Monolignol Biosynthesis Gene Families AT5G48930 36.175 1.09e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2414 K15400 - gmx:100794490 695.656