Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2402 ATGATGGATGATGGCCAAAAACACGGAAACAGTAGGCATACAATAGACTACTACAGAGGAGCAAATTCCCCGTGGAGTATGGCTTCGCAGCATCAAGTAACGGAACCAAATGCACTAGTTATGAATAAGAAAATTAGGTCCATTATGGCCGAAAGGCGTGCAATTCTAGAATTGGAAGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTAGAGATGAGGCCCTTCGTCAGAGGGATGAAGCAATTGCTCAGAGGGATAATGCCATAAGGGAACGCGATAATGCCCTTGCTGCACTTCAAAATCGGGAAGATGCTATCAACTTCTCATTGGGCAATGGAGTTCAACGCGGTTCAAAACGAATGCACCATCCTGCTAACTATCTAGATAACATGACAGATGCCACATACAACACAAAGGATGTGCGGATCACTGATGCCTTCCCGGTGACAATCATACCTTCTGATGCTATCAAATCACATCAGGCTAAGAAAACTAAGGAGAACAAGACAATCTCTCCTAAGGCATCAAAGACTCCTAGTAAAGGAAAGAAAATGGGTGAGGATTTAAATCAAAGGGCATCTTCGGAAGGGACGAAGTTCAAATCAGAATGGGATAGGCAAGATGTTGGCTTGAATTTGGTTACCTTCGATGAAACTTACATGCCCGTCCCGGTTTGCACATGCACGGGAGTACCACGGCAGTGCTACAAATGGGGTAATGGTGGATGGCAGTCATCTTGTTGTACCACCACTTTGTCAGTATATCCGCTACCGCAGCTTCCTAACAAGCGCCATGCACGCATCGGAGGGAGAAAGATGAGCGGCAGTGTCTTCACACGATTACTAAGTAGGTTTGCAGCACAAGGACATGATTTATCTGTACCATTGGATCTTAAGGACTACTGGGCCAGACATGGAACAAATCGCTACATTACTATCAAGTAG 948 0.4515 MMDDGQKHGNSRHTIDYYRGANSPWSMASQHQVTEPNALVMNKKIRSIMAERRAILELEAAISEKNEALAARDEALRQRDEAIAQRDNAIRERDNALAALQNREDAINFSLGNGVQRGSKRMHHPANYLDNMTDATYNTKDVRITDAFPVTIIPSDAIKSHQAKKTKENKTISPKASKTPSKGKKMGEDLNQRASSEGTKFKSEWDRQDVGLNLVTFDETYMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFAAQGHDLSVPLDLKDYWARHGTNRYITIK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2402 315 PANTHER - 2 315 IPR010409 -
Amo08g2402 315 SMART GAGA_bind_2 2 315 IPR010409 -
Amo08g2402 315 Pfam GAGA binding protein-like family 2 315 IPR010409 -
Amo08g2402 315 Coils Coil 58 99 - -
Amo08g2402 315 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 315 - -
Amo08g2402 315 MobiDBLite consensus disorder prediction 160 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2402 Amo-Chr8 37726113 37729582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2402 2 315 BBR or BPC Transcription factor family AT2G21240 56.782 2.00e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Amo08g2402 GAGA_bind 3e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2402 - - jre:108986984 508.449