Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2360 ATGGACCCTGCTGACGCATTCACAACAAGCCTCTTCAAGTGGGACCCACGCACCGTCCTTCCTCCTCCTCCATCCTCCGCCACTCGTCCGCCGCCTCAGATCCTTGACTACACCGTTGCTCCCCCTGCTGTCTCCCCTTCTTCGGTGTCCTTCCCGCCGCCTAAGAGACCTGACCTAGGAGGTCTGGAGGAGCTTTTCCAAGCCTACGGTATACGCTACTACACGGCGGCGAAGATGGCGGAGCTAGGGTTCACGGTGAGGACTCTTATTGATATGAAAGACGATGAGATCGACGACATGATGAATAGCCTCTCTCAGATCTTCCGCTGGGACCTTCTCGTCGGTGAGAGGTACGGCGTTAAGGCTGCCGTTAGAGCTGAGCGCCGCCGTCTTGAGGAAGAGGAGCTTATCAAACGCCGTAACTTCCTCTGCACCACCGATACCACCACCAACGCCCTTGACGCTCTTTCTCAAGAAGGTTTATCAGAGGAACCGGTGCAACAAGAGAAAGAGGCTGCGGGAAGCGGGGGAGGGAGTACGTGGGAGGTGGTAGGCGGCGGAGAAGAGAGGAGGAAGCAGGTGCAGCAAGAAAGGAGGAGGAGAAGAAGCAACAAGATAAATAATAAGGGAAGTAATAGAAGCAACAACGAGGATGGTGAAGAGGAAGAGTTAGAAGGAGAAGAGAATGACATGATTGAAGGGAGCAATGGCGGCAGTGGCGGAGAAAGGCAAAGAGAGCACCCCTTCATAGTGACTGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAATGGATTGGACTACCTTTTTCATCTCTATGAACAATGCCGTGAGTTCTTGATCCAAGTTCAAGCCATTGCGAAGGACCGTGGGGAAAAATGCCCCACCAAGGTAACAAATCAAGTATTCAGGTATGCAAAGAAAGCAGGTGCAAGCTACATCAACAAGCCAAAGATGAGGCACTACGTACATTGCTATGCACTGCACTGCCTCGACGAGGACGCGTCTAACGAGCTCCGACGAACCTTCAAGGAGAGAGGCGAGAACGTTGGCGCCTGGAGGCAAGCGTGTTACAAGCCTTTAGTTGCGATAGCTGCTCGCCAGGGCTGGGACATTGATGCCATCTTCAATGCTCATCCTCGCCTTTCCATTTGGTATGTCCCTACTAAGCTCCGCCAACTTTGTCATGCTGAGAGTAACAACGCTGCCGTCGTCGTCGCCGCCACCGTAGCCGTCTCTACCTCTGTTTCGTCAGCAGTTGCCCAACTTCCTTTTTAA 1275 0.5341 MDPADAFTTSLFKWDPRTVLPPPPSSATRPPPQILDYTVAPPAVSPSSVSFPPPKRPDLGGLEELFQAYGIRYYTAAKMAELGFTVRTLIDMKDDEIDDMMNSLSQIFRWDLLVGERYGVKAAVRAERRRLEEEELIKRRNFLCTTDTTTNALDALSQEGLSEEPVQQEKEAAGSGGGSTWEVVGGGEERRKQVQQERRRRRSNKINNKGSNRSNNEDGEEEELEGEENDMIEGSNGGSGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNELRRTFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAESNNAAVVVAATVAVSTSVSSAVAQLPF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2360 424 Pfam Floricaula / Leafy protein SAM domain 58 135 IPR035079 -
Amo08g2360 424 MobiDBLite consensus disorder prediction 1 55 - -
Amo08g2360 424 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 236 401 IPR035209 GO:0003677
Amo08g2360 424 Gene3D Protein LEAFY 239 408 IPR038276 -
Amo08g2360 424 PANTHER PROTEIN LEAFY 1 408 IPR002910 GO:0003677|GO:0006355
Amo08g2360 424 MobiDBLite consensus disorder prediction 158 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2360 Amo-Chr8 36993207 36996416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2360 1 420 Orphan Transcription Factor Family AT5G61850 59.039 2.67e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Amo08g2360 C_LFY_FLO 3.6e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2360 - - gsj:114416001 536.184