Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2312 ATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTGGATTTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTGACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCTGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAAGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTTTCACGCAAAGGGACATGTACAATAA 693 0.43 MKGLIASIHHMISMSRRKKNMRKLTWIYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFDFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYEYLFHAKGHVQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2312 230 Pfam FAR1 DNA-binding domain 83 173 IPR004330 -
Amo08g2312 230 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 43 185 - -
Amo08g2312 230 Coils Coil 230 230 - -
Amo08g2312 230 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2312 Amo-Chr8 36509386 36510078 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo08g2312 FAR1 2.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2312 - - adu:107463640 461.455