Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2303 ATGGGTAGATCTCCTTGTTGTGAGAAAGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGATGAACGCCTCATCAACTACATCAAGATTCATGGTGAAGGTTGTTGGAGATCTCTTCCCAAAGCTGCTGGTTTATTGAGATGTGGAAAGAGTTGCAGATTGAGATGGATAAATTACCTGAGGCCTGATCTAAAGAGAGGAAACTTCACTGAAGAAGAAGATGAACTCATCATCAACCTTCATAGCTTACTTGGAAACAAGTATGAACAAACACACACTACTATTTCATTGCATTTCATTTCTTTACAATTATCTCAAATATATTCAATATAA 336 0.372 MGRSPCCEKEHTNKGAWTKEEDERLINYIKIHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNKYEQTHTTISLHFISLQLSQIYSI* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2303 111 Gene3D - 66 102 - -
Amo08g2303 111 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Amo08g2303 111 SMART sant 13 63 IPR001005 -
Amo08g2303 111 SMART sant 66 106 IPR001005 -
Amo08g2303 111 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 91 - -
Amo08g2303 111 Gene3D - 14 65 - -
Amo08g2303 111 CDD SANT 16 61 IPR001005 -
Amo08g2303 111 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Amo08g2303 111 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Amo08g2303 111 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Amo08g2303 111 PANTHER TRANSCRIPTION FACTOR MYB7 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2303 Amo-Chr8 36363972 36364562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2303 1 89 MYB Transcription Factor Family AT4G38620 93.258 8.81e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo08g2303 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2303 K09422 - gmx:778033 193.741