Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2300 ATGGATGGTGTTTCAACTTTCAACTATGTCAGAAGAGGAGAAGCTTTGCCTCAGATACCAAAGGCGTACATTAGAATCAGGGACGAAAACATGACGGTCTTCATGGTTAAAAAATATCTTGTTACAAAACTTGGTCTCTCCAACGAAGCTGAGATTGATATCTTATGCATGGGTGAAAGCTTATCGCAGATACAAACATTGAAGCAAGTAAGAGAGGCTGTTTGGATACCTAGATTGGTAGAATCTTTAGATTCAACAACTTTCTCCCTTGGAGATTCCAATCATAATAATAATGATGATTATATGTCTTTAAACCATATCATGTCTCTGCTTTACCGAAAACATTTTGTATGTTTTGGAAATAGGCTACCAAAAGTCGCTTATTCTGATAGTTTCACCATAAATAAGATTACTGTTTTGTTTTCTTATGGGATTATGCATTTGATTCTTCTTCTTCCACTTTTCAATCTAAACTTAATTTCAACGGATTATATAACTTCACACAACATGGCTTAG 516 0.3469 MDGVSTFNYVRRGEALPQIPKAYIRIRDENMTVFMVKKYLVTKLGLSNEAEIDILCMGESLSQIQTLKQVREAVWIPRLVESLDSTTFSLGDSNHNNNDDYMSLNHIMSLLYRKHFVCFGNRLPKVAYSDSFTINKITVLFSYGIMHLILLLPLFNLNLISTDYITSHNMA* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2300 171 PANTHER - 11 115 - -
Amo08g2300 171 PANTHER RING FINGER PROTEIN 11 115 IPR044171 GO:0007275
Amo08g2300 171 Gene3D - 6 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2300 Amo-Chr8 36292725 36298567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2300 16 67 C3H Transcription Factor Family AT3G23060 44.231 1.80e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2300 - - adu:110274740 207.608