Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2298 ATGGCACAGTGGGGTGTTCGTCATCGATTGCCATTCATGGGTCAGCACGATGATGAGGGATATGAAAGTCAGCTTCCCGACTTCCCTAAGGAAGAGGAATCTAATGATGAAGAAGGAGAAGAAAAAATCATTAATACTGAGTCGTTATTTTTGCCAGAAACTAAGAAGAGGAAGCGAATTAGCCTTAGTCAGCTCAGAGAGGTAAAAGAGGAGCCATGTGGGAGGCAAAGTAGTCGCAAGCTTAAGACAAAAAAGCCTGACAGTAAGGATAGATGGTCAACTGAGAGGTATAAATTGGCTGAGCAAAGTATGTGGGAGGTGTTAAAGGCTGAAGGTGCAACTTTTGAAAAGCCAATAACCCGACCTGCATTAAGAATGGCAGCACGTAAGCACATTGGCGATACTGGACTCTTGGACCACTTATTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGTACTGAGCGCTTCCGAAGATGGTTCAACACCAAAGGAATCATGGAGTATTGGTTGGAAAGTGCTGACTTGGATGATGTCCGCCAGCTGGCAGGGGTGCAGGATCCTTACTGGATACCACCGCTAGCAATTAGGGCTGGCAGTGCCCCTTCTCAGAAGACTGATTCGTCTGATGAATTGAAACTACTTAAAATGGAAATGGCCCAACTGAAGAAAGATATGCAGCAGCTCATTGCCAAGCAGCAACCGAAAAGTGAAGTTAGTCTCATGGAGGAGTCTCACAAGGAATTGGTGAAGTGGAGATCTGGTATTGATCATCACCTTACTGAAATCATGGCATCTCTGAAGGGTGTGCAGGGCAAGTATGGTGAATTTACAATTTGGAAAACTAAAGTTGAGCAACAGTTTGCCGAAATAACAAATAAATTGAGTGATCTCAAAGCATCAAGGGAATGTGTTCCCCCTAGTTCTCCTTCAGACAGGTGGAAAGATTGGATAGAAAATACTAACCTACCGGAAGATGAATTTGCAACTTGGATTGGAAGTTCTGAGCTGCTTAATGTTCCACCAGAGATGGTACTTGATGACCCCAACACATCCCTCCCGACGCACTTACTTAGCGAAGGATTGGTTAACAAGCGGAGTGATTTGCTGGAGGTGGTGCCTTTCAAACAAGAAGATCCTCCTAATGTGACCCCTGACTCGTCTACGACTGTTAATTCTAAGTCAGACCATGACAACTCAATGATGATGTTTCAGGAGATGTACATGGATATATTCAAATGGAAAGAACAAATTGATAAGCAGATGATGGAGTTATCAAACACTGTATACGGTATGCTGGCAATGAAGTAG 1311 0.4401 MAQWGVRHRLPFMGQHDDEGYESQLPDFPKEEESNDEEGEEKIINTESLFLPETKKRKRISLSQLREVKEEPCGRQSSRKLKTKKPDSKDRWSTERYKLAEQSMWEVLKAEGATFEKPITRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESADLDDVRQLAGVQDPYWIPPLAIRAGSAPSQKTDSSDELKLLKMEMAQLKKDMQQLIAKQQPKSEVSLMEESHKELVKWRSGIDHHLTEIMASLKGVQGKYGEFTIWKTKVEQQFAEITNKLSDLKASRECVPPSSPSDRWKDWIENTNLPEDEFATWIGSSELLNVPPEMVLDDPNTSLPTHLLSEGLVNKRSDLLEVVPFKQEDPPNVTPDSSTTVNSKSDHDNSMMMFQEMYMDIFKWKEQIDKQMMELSNTVYGMLAMK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2298 436 MobiDBLite consensus disorder prediction 376 397 - -
Amo08g2298 436 MobiDBLite consensus disorder prediction 11 30 - -
Amo08g2298 436 PANTHER DYAD PROTEIN 2 435 - -
Amo08g2298 436 MobiDBLite consensus disorder prediction 67 92 - -
Amo08g2298 436 Coils Coil 281 301 - -
Amo08g2298 436 Coils Coil 205 232 - -
Amo08g2298 436 MobiDBLite consensus disorder prediction 1 48 - -
Amo08g2298 436 PANTHER PROTEIN DYAD 2 435 IPR044221 GO:0007131|GO:0051177|GO:0051321
Amo08g2298 436 MobiDBLite consensus disorder prediction 381 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2298 Amo-Chr8 36254194 36258066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2298 77 172 PHD Transcription Factor Family AT5G22260 37.113 5.73e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2298 - - gmx:100806484 633.254