Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2286 ATGGGTAGATCTCCTTGTTGTGAGAAAGAACACACAAACAAAGGTGCTTGGACCAAAGAGGAAGATCAACGCCTCATCAACTACATCAAGATTCATGGTGAAGGTTTATTGAGATGTGGAAAGAGTTGCAGACTGAGATGGATAAATTACCTGAGGCCTGATCTAAAGAGAGGAAACTTCACTGAAGAAGAAGATGAACTCATCATCAACCTTCATAGCTTACTTGGAAACAACACCAACATTATTAATGACAACAATAATAACAAGTTTCAATTGGTGAGTGACTTGGTTTGTGAAGATTCATCAAATAGTAGCAGTGGGTTTCAAAGTAACAATAACAAAGTGTGTAGCTGCAAAGGTGCCATTGTTGGTGGTACGGCGGTTACTACAACCGCCGCAGATAATAGCTTGTATAGATTTTACAGACCTATGAATATATAG 441 0.3878 MGRSPCCEKEHTNKGAWTKEEDQRLINYIKIHGEGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIINLHSLLGNNTNIINDNNNNKFQLVSDLVCEDSSNSSSGFQSNNNKVCSCKGAIVGGTAVTTTAADNSLYRFYRPMNI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2286 146 ProSiteProfiles Myb-like domain profile. 9 51 IPR001005 -
Amo08g2286 146 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 83 - -
Amo08g2286 146 CDD SANT 16 51 IPR001005 -
Amo08g2286 146 Pfam Myb-like DNA-binding domain 14 51 IPR001005 -
Amo08g2286 146 PANTHER MYB DOMAIN CLASS TRANSCRIPTION FACTOR 1 83 - -
Amo08g2286 146 SUPERFAMILY Homeodomain-like 15 79 IPR009057 -
Amo08g2286 146 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 55 IPR017930 -
Amo08g2286 146 SMART sant 13 53 IPR001005 -
Amo08g2286 146 SMART sant 56 115 IPR001005 -
Amo08g2286 146 Gene3D - 14 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2286 Amo-Chr8 36141880 36143226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2286 1 82 MYB Transcription Factor Family AT4G38620 78.261 8.54e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo08g2286 Myb_DNA-binding 6.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2286 K09422 - gmx:778033 157.532