Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2275 ATGGCGTCGTCGTCGTCCCTCTGCGTCGCCCACAGGTGCTCTGTTCTGCTCCGCTCGTCCGCCTTGCCTCACCGCGCCTCGCGGTGCCTTGCCTCAAATCGCCGCTCCTCAAATCTTCCTCCTACTACACTAAGAACCGGAGAAATAGATTTGCAGGCACAATTGGCCTCTATTCCCACTAGCAATCAAGAAACTGAACTCACCATTGACGATGACTTTGATATCTCGGGATTGAAGCCCCTCAAAGTCCCTACCCAGATCTTCTTCAAACACTCTTCCATGGATCCCCACAAAAAGGGTTCTGCAGAAGCTGAGTTTTTCACTGAGTATGGAGAGGCAAGAAGTTATGGCATCGTGGGCTCTGCCCTTGACACTCATACTGGGGAAAAAGTTGCAATAAAAAAAATCAATGATGTTTTTGAACATGTATCGGATGCTACAAGAATTCTAAGAGAAATTAAGCTCCTGCACTTGCTTCGCCATCCTGATATAGTAGAAATTAAACATATTATGCTTCCTCCTTCCCGTCGAGAGTTCAAGGATATCTACGTTGTCTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCAAACGATGATCTTACACCTGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATATATACATACAGCAAATGTTTTTTATCGTGACTTAAAGTCCAAAAATATTCTTGTCAATACTGATTGTAAACTAAAGATATGTGATTTTGGACTTGACTATGTTGCAACTCGGTGGTACCGGGCACCTGAATTATGTGAAATGCTCAATGGAAAGCCATTGTTTTCGGGTAAAAATGTGGTGCACCAATTGGATCTCATGACCGATTTGCTTGGCAGTCCTCCATCTGAGTCCATTGCAAGGGTAGCAGCTAATTATGTAGCAATGGTTCCTTCCGGACAAGTATTTGATAGAATGATGTTTCTTCCCGTGTATTGTCTGAACCTTATCCAGGTAAAGAAGCGAAAGATTAATGCAGAAAAGAAGAGGAAAGAGCTCGAGAAGGAGAGAGCGAAGGATGAACTTCTGACGAGAAAGCGCCAGAATGCTTTGCAGCATGTGCTGGTTGTGCTGGCTTTGCGGCATTCTCAGTCGTTATAG 1140 0.4412 MASSSSLCVAHRCSVLLRSSALPHRASRCLASNRRSSNLPPTTLRTGEIDLQAQLASIPTSNQETELTIDDDFDISGLKPLKVPTQIFFKHSSMDPHKKGSAEAEFFTEYGEARSYGIVGSALDTHTGEKVAIKKINDVFEHVSDATRILREIKLLHLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFYRDLKSKNILVNTDCKLKICDFGLDYVATRWYRAPELCEMLNGKPLFSGKNVVHQLDLMTDLLGSPPSESIARVAANYVAMVPSGQVFDRMMFLPVYCLNLIQVKKRKINAEKKRKELEKERAKDELLTRKRQNALQHVLVVLALRHSQSL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2275 379 ProSitePatterns MAP kinase signature. 140 243 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo08g2275 379 Coils Coil 329 361 - -
Amo08g2275 379 SUPERFAMILY Protein kinase-like (PK-like) 115 316 IPR011009 -
Amo08g2275 379 Gene3D Phosphorylase Kinase; domain 1 115 188 - -
Amo08g2275 379 Pfam Protein kinase domain 115 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2275 379 Gene3D Transferase(Phosphotransferase) domain 1 267 307 - -
Amo08g2275 379 Gene3D Transferase(Phosphotransferase) domain 1 189 266 - -
Amo08g2275 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 267 303 - -
Amo08g2275 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 83 266 - -
Amo08g2275 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 267 303 - -
Amo08g2275 379 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 83 266 - -
Amo08g2275 379 ProSiteProfiles Protein kinase domain profile. 108 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2275 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Amo08g2275 379 SMART serkin_6 115 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2275 Amo-Chr8 35995315 35997381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2275 66 302 MAP Kinase Gene Family AT1G18150 68.310 2.43e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo08g2275 Pkinase 9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2275 - - gmx:100795768 405.216