Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2270 ATGGAGAGGAAGCCATCATCACTTGGGTTGTTCTTCCTTCTCATTAAATGGTGGTGCATACAGAGGCAAGGGTGTGTCAGTCAAAGAACCACATGTTCAAGGGTGGATGCTGGGGTGACCAGTGACCACAACTGTGCTCTAGTTTGCCGGAACGAGGGCTTTTCCGGTGGTCGCTGCCACAGGTTTCACCGCCGCTGCTTTTGCACTAAGCTTTGTTAA 219 0.5114 MERKPSSLGLFFLLIKWWCIQRQGCVSQRTTCSRVDAGVTSDHNCALVCRNEGFSGGRCHRFHRRCFCTKLC* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2270 72 Pfam Gamma-thionin family 40 72 - -
Amo08g2270 72 CDD Knot1 41 69 IPR003614 GO:0006952
Amo08g2270 72 SMART gth_4 24 72 IPR003614 GO:0006952
Amo08g2270 72 Gene3D - 18 72 IPR036574 -
Amo08g2270 72 SUPERFAMILY Scorpion toxin-like 39 72 IPR036574 -
Amo08g2270 72 PANTHER DEFENSIN-LIKE PROTEIN 1 20 72 - -
Amo08g2270 72 PANTHER DEFENSIN-LIKE PROTEIN 20 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2270 Amo-Chr8 35945546 35946370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2270 1 72 Plant Defensins Gene Families AT5G63660 52.000 7.62e-17 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2270 - - lang:109326357 56.9954