Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2247 ATGGACAAATACGAGGCTGTGAAGGATTTGGGAGCTGGCAATTTCGGTGTTGCCAGGCTCATGAGGAACAAGGTCACAAAGGAGCTCGTCGCAATGAAATACATCGAGCGTGGCCGCAAGATTGATGAGAACGTGGCTAGAGAGATTATCAACCACAGGTCCCTTAGGCACCCCAATATAATTCGTTTCAAGGAGGTTGTGTTGACTCCGACGCATCTAGCTATAGTAATGGAGTATGCTGCCGGAGGAGAACTCTTCGAGAGGATATGCAGTGCTGGCAGGTTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCCATTTCTGCCATAATATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCAGCACCTCGCTTAAAAATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACACCAGCTTATATAGCACCGGAGGTTCTTTCTAGGCGAGAGTATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTCATGTTGGTTGGAGCATATCCATTCGAGGACCAGGATGATCCGAGGAATTTCAGAAAAACAATTCAGCGTATAATGAGTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAGGATTGTAGACAACTTCTCGCTCGTATATTTGTTGCAAATCCATTGAGGAGAATCACACTAAAGGAAATTAAGAACCACCCATGGTTTTTAAAAAATCTTCCAAGAGAGCTAACTGAACCGGCTCAAGCTATCTATTACCAGAGAGACAATCCAAACTTTCATGTTCAGAGTGTGGAGGAGATAATGAAAATTGTGGGAGAGGCGAGAAACCTGCCTCCAGTATCTAGGCCTGTCAAAGGTTTTGGCTGGGAAGGCGAAGACAACGAAGGAGCAGAAGAAGTAGAAGAAGAAGTAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAAGATGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTCCAAATTAGTTAA 1077 0.4392 MDKYEAVKDLGAGNFGVARLMRNKVTKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVHFCHNMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMSVQYKIPDYVHISQDCRQLLARIFVANPLRRITLKEIKNHPWFLKNLPRELTEPAQAIYYQRDNPNFHVQSVEEIMKIVGEARNLPPVSRPVKGFGWEGEDNEGAEEVEEEVEEEVEEEEEEDEYDKRVKEVHASGEFQIS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2247 358 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 351 - -
Amo08g2247 358 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Amo08g2247 358 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2247 358 MobiDBLite consensus disorder prediction 318 342 - -
Amo08g2247 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Amo08g2247 358 MobiDBLite consensus disorder prediction 308 358 - -
Amo08g2247 358 SUPERFAMILY Protein kinase-like (PK-like) 2 293 IPR011009 -
Amo08g2247 358 Coils Coil 319 345 - -
Amo08g2247 358 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2247 358 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2247 358 CDD STKc_SnRK2 3 259 - -
Amo08g2247 358 PANTHER SERINE/THREONINE KINASE 2 351 - -
Amo08g2247 358 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Amo08g2247 358 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2247 Amo-Chr8 35486943 35489237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2247 3 281 CBL-interacting serine-threonine protein kinases AT4G24400 41.667 5.11e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo08g2247 Pkinase 6.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2247 K14498 - gmx:547968 648.277