Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2236 ATGAAACTGTTGGAGGTGCCTCTTCCGGACGCAGAGCTGTTTGCCGCAGACGTGGGACCATCTCAGTTTCAGTCGCCCTCATCCTCCAATTTTCAGTCTCTGCCTCTGCATCATCCGGTCTGGACTGGGGACGAAAACCATAATCTTGCCGCCAATGTCGGTGGTAATCAACAGCCTCAGCCTCAGCTTCCGCTTCCATCGCAGCTTGCCACCGATGTGCCTCTGCTGCAGTTTGCCGCCAATGTCGGTGGTAACCAACCGCCTCAGTTGCAGCTTCCGCCTCTGCATGAGTTTCCCGCTGACGTGTGTGGCTATCAACAACCTCAGGCACAGCCTGAGCCCGTCTGGAGTGAGGATGAGAACAAACAGTTTGAAATAATTATTGCTGAATGTCTTCCGGAAGAAATGCAGAACCGGTGGGAGGCTGTGGCTGCTTGTCTCCCCGGGAAGACCCCCGAGCAGATACAGGAACGCTTCCAGGAGCTCCTCACCGACATCAATCTCATCCATAAATCTTATATCAATCTGCATCACACCTCCATCGCACCTGCTGCACCTCCCACCACATTGGAACGCAATCCACTCTCCCTCCCCGGAACAATTGAACAAAACCAACCTGCCAACACCAACATAATCGAACACCAACCTTTAACTAAGACTACTGAAAGAAAGAAAACAGTTCATTGGACTCAACAAGAGAAAGAGTTATTTCTTAGGGGATATAAAGAATTAGGACGTAATTGGAAAAGAATTTCGGAAGATTATGTCAAAACAAGAACGAAAGAACAAGTTGCTAGCCATGCACAAAAAGTTCTAAAAAAATTAGCTGAAAAAATAGAAGAAATAACATTTGTGATGAATGATAGTAAGTTATCTTCTCATTCTTAA 888 0.4707 MKLLEVPLPDAELFAADVGPSQFQSPSSSNFQSLPLHHPVWTGDENHNLAANVGGNQQPQPQLPLPSQLATDVPLLQFAANVGGNQPPQLQLPPLHEFPADVCGYQQPQAQPEPVWSEDENKQFEIIIAECLPEEMQNRWEAVAACLPGKTPEQIQERFQELLTDINLIHKSYINLHHTSIAPAAPPTTLERNPLSLPGTIEQNQPANTNIIEHQPLTKTTERKKTVHWTQQEKELFLRGYKELGRNWKRISEDYVKTRTKEQVASHAQKVLKKLAEKIEEITFVMNDSKLSSHS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2236 295 Gene3D - 109 175 - -
Amo08g2236 295 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 115 277 IPR043363 -
Amo08g2236 295 ProSiteProfiles Myb-like domain profile. 221 272 IPR001005 -
Amo08g2236 295 ProSiteProfiles SANT domain profile. 229 278 IPR017884 -
Amo08g2236 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 276 IPR017930 -
Amo08g2236 295 SMART sant 225 274 IPR001005 -
Amo08g2236 295 SMART sant 112 165 IPR001005 -
Amo08g2236 295 Gene3D - 228 275 - -
Amo08g2236 295 Pfam Myb-like DNA-binding domain 115 163 IPR001005 -
Amo08g2236 295 Pfam Myb-like DNA-binding domain 227 272 IPR001005 -
Amo08g2236 295 ProSiteProfiles Myb-like domain profile. 116 163 IPR001005 -
Amo08g2236 295 CDD SANT 229 272 IPR001005 -
Amo08g2236 295 CDD SANT 116 163 IPR001005 -
Amo08g2236 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 224 271 IPR006447 GO:0003677
Amo08g2236 295 SUPERFAMILY Homeodomain-like 221 275 IPR009057 -
Amo08g2236 295 SUPERFAMILY Homeodomain-like 113 164 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2236 Amo-Chr8 35406595 35409212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo08g2236 Myb_DNA-binding 5.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2236 - - ahf:112708481 528.48