Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2231 ATGGCCGCAGAAATTTGTCGCGCGTCTCCTCTCTTATCCGTTAAAACTCAACTTTTCCACGCGCCACCATCACCAACCACCACCACCACCACCACTACCAGCAGATTCCACACATCATCTCATTCCAAAACTTCCTTATTCTCTCATCGCGTTCTCAATCTAAATGCCTCTTTCTCCGCTGTCCGTCGCCGCAGCTCCGCCGTCATCTGCCAGGCTAACACTCTCTTCGAGATCGACTCCGTCGCAAAAGCTGGCCAAGACCGTCTGGAAAAGGTGCCGGTGTCGAATATAAGGAACTTCAGCATAATTGCGCATATTGATCACGGGAAATCCACGTTAGCAGATAAATTGCTTCAGGTTACTGGCACCGTTCACCAGCGAGAGATGAAGGACCAGTTTCTCGATAACATGGACCTCGAGAGAGAACGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGGTATGTGTTTGAGAATAAACCATATTGCTTGAATTTGATTGATACTCCCGGGCATGTTGACTTCTCGTATGAGGTTTCTCGGTCACTTGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGAGTAGAAGCACAAACGCTAGCTAATGTTTATTTGGCCTTGGAAAACAATCTAGAAATTATCCCAGTTTTGAACAAGATAGATCTTCCGGGTGCTGAACCAGATCGAGTTATTAAGGAGATTGAAGAGGTTGTGGGTCTGGATTGTAGCAATGCTATTCTGTGCTCCGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCGAGAATTCCACCACCTGCTGATACATCACAAAGGCCATTAAGGGCTTTAATATTTGATAGTTACTATGATCCATATAGAGGTGTTATTGTATACTTCCGGGTTGTGGACGGGACTATAAAGAAAGGTGATAGAGTCTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCGAATCAACAAGAGGTTAAAGAATTATATGCTGGAGAGGTGGGCTACCTGTCGGCGTCAATAAGAACAGTAGCTGATGCCAGAGTGGGTGACACAGTGACTCACTATGGTCGAAAGGCAGATCAATCACTCCCTGGATACGAGGAAGCGACTCCTATGGTGTTTTGTGGCCTGTTTCCTGTTGACGCTGACCAATTTCCTGATCTACGTGATGCCCTTGAGAAGCTACAACTTAATGATGCTGCACTGAAGTTTGAACCGGAGACTTCAAGTGCCATGGGATTTGGGTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATTGTCCAGGAAAGACTTGAGAGAGAATACAATCTGAGCTTGATAACTACCGCTCCAAGTGTTGTTTACAGAGTGAACTGTGTAGATGGAGATACTGTTGAATGCTCGAATCCATCTTTACTTCCTGAACCTGGAAAAAGGAGATCAATTGAGGAGCCATATGTTAAGATTGAGATGCTTTCGCCAAAGGATTATATCGGGTCACTTATGGAACTGGGACAAGACAGAAGAGGATTGTTTAAAGAAATGAAGTTTATCACTGAAAATAGAGCATCAATCACCTACGAAATACCACTAGCGGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCGAGAAGTAAGGGTTATGCTAGTATGGAGTATACCTTTATCGGGTACAGAGAAAGTGATTTAATTAAACTTGACATATTGATAAATGGTGACAGTGTGGAGCCATTGGCTACGATTGTCCACAGAGATAAGGCTTATTCTGTTGGAAGGGCTTTGACTCAAAAGCTGAAGGAGCTCATACCACGTCAAATGTTTAAAGTACCAATCCAAGCATGCATAGGATCAAAAGTGATTGCTAGTGAAGCTTTATCTGCAATAAGGAAGGATGTCTTAGCCAAATGTTATGGTGGCGACATTTCGAGGAAAAAGAAGTTACTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAGTCCATTGGTAAAGTTGATGTGCCTCAAGAAGCTTTCATGGCGGTCTTGAAATTGGAAAAGGAGGTGATATGA 2079 0.4348 MAAEICRASPLLSVKTQLFHAPPSPTTTTTTTTSRFHTSSHSKTSLFSHRVLNLNASFSAVRRRSSAVICQANTLFEIDSVAKAGQDRLEKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYVFENKPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEVVGLDCSNAILCSAKEGIGIIDILNAIVARIPPPADTSQRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQQEVKELYAGEVGYLSASIRTVADARVGDTVTHYGRKADQSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVDGDTVECSNPSLLPEPGKRRSIEEPYVKIEMLSPKDYIGSLMELGQDRRGLFKEMKFITENRASITYEIPLAEMVGDFFDQLKSRSKGYASMEYTFIGYRESDLIKLDILINGDSVEPLATIVHRDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2231 692 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 135 150 IPR031157 -
Amo08g2231 692 Gene3D - 94 277 IPR027417 -
Amo08g2231 692 PRINTS GTP-binding elongation factor signature 142 150 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 PRINTS GTP-binding elongation factor signature 166 176 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 PRINTS GTP-binding elongation factor signature 99 112 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 PRINTS GTP-binding elongation factor signature 182 193 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 PRINTS GTP-binding elongation factor signature 218 227 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 Hamap Elongation factor 4 [lepA]. 92 690 IPR006297 GO:0005525
Amo08g2231 692 CDD LepA 98 275 - -
Amo08g2231 692 SUPERFAMILY EF-G C-terminal domain-like 491 585 IPR035647 -
Amo08g2231 692 CDD lepA_C 493 572 IPR035654 -
Amo08g2231 692 Gene3D - 572 646 IPR038363 -
Amo08g2231 692 PANTHER TRANSLATION FACTOR GUF1-RELATED 85 686 IPR006297 GO:0005525
Amo08g2231 692 SUPERFAMILY EF-G C-terminal domain-like 384 462 IPR035647 -
Amo08g2231 692 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 85 686 - -
Amo08g2231 692 Pfam Elongation factor Tu GTP binding domain 96 273 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 Pfam Elongation factor Tu domain 2 297 367 IPR004161 GO:0005525
Amo08g2231 692 CDD EF4_II 283 368 - -
Amo08g2231 692 Pfam GTP-binding protein LepA C-terminus 580 686 IPR013842 -
Amo08g2231 692 CDD EF4_III 385 460 - -
Amo08g2231 692 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 89 689 IPR027518 -
Amo08g2231 692 Pfam Elongation factor G C-terminus 491 577 IPR000640 -
Amo08g2231 692 TIGRFAM small_GTP: small GTP-binding protein domain 98 267 IPR005225 GO:0005525
Amo08g2231 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 293 IPR027417 -
Amo08g2231 692 Gene3D Elongation Factor G (Translational Gtpase), domain 3 378 459 - -
Amo08g2231 692 Gene3D Translation factors 278 377 - -
Amo08g2231 692 MobiDBLite consensus disorder prediction 20 39 - -
Amo08g2231 692 TIGRFAM lepA: elongation factor 4 96 687 IPR006297 GO:0005525
Amo08g2231 692 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 95 276 IPR000795 GO:0003924|GO:0005525
Amo08g2231 692 SMART EFG_C_a 490 578 IPR000640 -
Amo08g2231 692 Gene3D - 460 571 - -
Amo08g2231 692 SUPERFAMILY Translation proteins 257 379 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2231 Amo-Chr8 35364510 35374459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2231 97 330 Eukaryotic Initiation Factors Gene Family AT3G22980 34.413 3.05e-26 113