Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2211 ATGTTTCAACTCAAAATATTTTCAAGTTGGTTGATATTTCTGAGTGTATTGAGGCACAGTTATCCAATCACAGATCCTGATGTGGAAGGGGAAGCATTGATTGAATTTCTGAGGGCCCTCAATGATTCCAACAATCAAATTAAAGATTGGAATAGTTTTTTTGTGAGCCCCTGCTATAGTTGGTCTAATGTTGATTGTAGCAACAAACATGTTATATCTCTGAACTTGGCATCAAAAGGATTTTCTGGAACACTTTCTCCCTCAATTGCCAAATTGAAATACTTGGTTAGCTTGGAGTTGCAGGACAACAATCTTGCAGGCCCTTTACCTGACTACATCGCCAACTTAACGCGCCTCGAATATCTTAATCTTGCTGAAAATAATTTCAGAGGTTCTGTCCCGGCTACTTGGGGCAGACTTTCGAGTCTAAAGCATCTGTTGTTGAAAGGGAATGAGTTATCTGGACATATTCCAGATACAATTGCAAACCTTACTGGATTGGCAGAATTGGATCTTTCATCTAATGGTCTTACTGGAACTGTCCCAATGCCACTCTTTTCATTTCCAATATTTAATTTTTCGAACACACTTCTTCGTTGCGGCTCTAGCTTGGATCAGCCTTGTGCTTCTAAACCTTCACTTTCTGGTTCAACCAACAAACCAAAACTTGTAAAGATTGTTGGTTTTGCAAGTTGTGGTTTATTTGCACTGATAATTCTTGGGGCTATCTTTGTATATAGATACCATCACATGCACAGACATAAAACTGATGTCTTTTTTGATGTTTCAGGTGAAGATGAGAGCCAAATTTCCTTTTGGCAACTGAGAAGATTTTCATGGCGTGAACTGCAACACGCGACTAAAAATTTCAGCAAAAGCAATGTAATTGGCACAGGAGGATTTGGAAAAGTTTATAAAGGAGTACTCTCAGATGGCACAAAAGTGGCCGTGAAACGCCTCGCCGATTATCAGGCTCCTGGTGGAGAAGCTGCATTCCAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAAGAATCTGCTAAGATTAATTGGATACTGTACAACCTCAGCTGAAAGAATCCTAGTGTACCCTTTCATGGAAAATAGAAGTGTAGCATATCAATTGAGAGATTTAAAAGAAGGTGAGAAAGGTTTAGACTGGGCAATGAGGAAAAATGTGGCATTTGGCACAGCACATGGATTAGATTATTTACATAATCAATGCAACCCTAAGATAATTCACCGTGATTTGAAAGCCGCAAATATTTTGTTAGATGATAACTTTGAAGCTGTTCTTGGAGACTTTGGCCTAGCTAAACTTGTTGATACAAGGGTGACTCATGTTACTACTCAAGTGAGAGGCACAATGGGTCATATAGCACCAGAATACTTGTGCACCGGAAAATCATCAGAGAAGACTGATGTGTTTGGATATGGTATAACACTTCTTGAATTGGTCACCGGTCAACGCGCCGTTGACTTGTTTCGGCTTCAAGAGGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAAAAACTATTGAAGGAAGACAGGGTGAAGGACATAGTAGATAGAAACCTAGAGACATATGATTCAGAGGAAGTAGAGAGAATAATTCATGTTGCATTGCTTTGCACAAGAAACTACCCAGAGGAGCGTCCCACAATGTCAGAGATAGTGAAAATGCTTCAAGGAGTGGGTTTGCAAGAGAGATGGAATGAATTGGAGCAACATAATAATGAAGAAGAGGTTAGTAATCAACTCATGTCTCACCAGTTTGTTTGGACTGCTGAATATTCAACCCTTGATCAAGAAGCTATAAGGCTTTCAGCAGCAAGATAA 1845 0.3951 MFQLKIFSSWLIFLSVLRHSYPITDPDVEGEALIEFLRALNDSNNQIKDWNSFFVSPCYSWSNVDCSNKHVISLNLASKGFSGTLSPSIAKLKYLVSLELQDNNLAGPLPDYIANLTRLEYLNLAENNFRGSVPATWGRLSSLKHLLLKGNELSGHIPDTIANLTGLAELDLSSNGLTGTVPMPLFSFPIFNFSNTLLRCGSSLDQPCASKPSLSGSTNKPKLVKIVGFASCGLFALIILGAIFVYRYHHMHRHKTDVFFDVSGEDESQISFWQLRRFSWRELQHATKNFSKSNVIGTGGFGKVYKGVLSDGTKVAVKRLADYQAPGGEAAFQREVQLISVAVHKNLLRLIGYCTTSAERILVYPFMENRSVAYQLRDLKEGEKGLDWAMRKNVAFGTAHGLDYLHNQCNPKIIHRDLKAANILLDDNFEAVLGDFGLAKLVDTRVTHVTTQVRGTMGHIAPEYLCTGKSSEKTDVFGYGITLLELVTGQRAVDLFRLQEEEEDVLLLDHIKKLLKEDRVKDIVDRNLETYDSEEVERIIHVALLCTRNYPEERPTMSEIVKMLQGVGLQERWNELEQHNNEEEVSNQLMSHQFVWTAEYSTLDQEAIRLSAAR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2211 614 SUPERFAMILY L domain-like 30 198 - -
Amo08g2211 614 PANTHER LRR RECEPTOR-LIKE KINASE 9 614 - -
Amo08g2211 614 Gene3D Ribonuclease Inhibitor 26 210 IPR032675 -
Amo08g2211 614 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 614 - -
Amo08g2211 614 SMART serkin_6 290 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2211 614 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Amo08g2211 614 Gene3D Phosphorylase Kinase; domain 1 259 366 - -
Amo08g2211 614 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Amo08g2211 614 Pfam Protein kinase domain 291 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2211 614 Gene3D Transferase(Phosphotransferase) domain 1 367 584 - -
Amo08g2211 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Amo08g2211 614 SUPERFAMILY Protein kinase-like (PK-like) 268 565 IPR011009 -
Amo08g2211 614 ProSiteProfiles Protein kinase domain profile. 290 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2211 614 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2211 Amo-Chr8 35120961 35125706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2211 26 608 Receptor kinase-like Gene Family AT5G65240 55.707 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo08g2211 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2211 - - adu:107463312 1214.13