Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2200 ATGGCTTTCACCTATTCTTCTTCATTTAGATCATGCAAGTATCATGTATTTCTGAGTTTCAGAAGTGAAGACACTCGCTATGTATTTCTGAGTTTCAAAAGTGAAGAGTATTTGGATTTGTCCAAACAGGTGATCCAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTGTTGGGTTCCCACCTTTATGACATTGCTTATTTTTTCAAAGGATGGTTTCAAGATACTGTTATAGCTATGTTAAAAGGGCGTGGTTATCATCTTGAAATTGGTATCGCGACTTTGATTGTTAGATCTCTACTCACTATAAATGAGGAAGGTAGGTTGAAGATACATGATTTGGTCGAAGAAATGGGCAAACATATTATAATTCAGGAATTTCCAAATGATCCTAGCAAGCATAGCATGTTGCAAAATTACGAGGACATCGATATTGTTCTTACTCAAAAGAAGATAAATGGAAAATTTTTCACAGGAACTGAGGCAACTCAGAGCATTGTTTTAGACGACAATACTGCGCTAAAGCTCCTCATTTTAGATGGCGTAAAAGTTCCAATTCGTAGCTATATTCCCCCTTTATTGAGAGTTTTGCGTTGGATAGAGTGTCCAATGGAAACTGTGTCCTTTATGGATCAATACTATGAGCTTGTTGAAATTAATCTTTATCTTTTTTTAGAAGATATTATGGAAAAGTAA 696 0.3578 MAFTYSSSFRSCKYHVFLSFRSEDTRYVFLSFKSEEYLDLSKQVIQYCAGLPLALEVLGSHLYDIAYFFKGWFQDTVIAMLKGRGYHLEIGIATLIVRSLLTINEEGRLKIHDLVEEMGKHIIIQEFPNDPSKHSMLQNYEDIDIVLTQKKINGKFFTGTEATQSIVLDDNTALKLLILDGVKVPIRSYIPPLLRVLRWIECPMETVSFMDQYYELVEINLYLFLEDIMEK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2200 231 Gene3D - 22 81 IPR042197 -
Amo08g2200 231 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 63 224 IPR044974 GO:0006952
Amo08g2200 231 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 63 224 - -
Amo08g2200 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 65 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2200 Amo-Chr8 34966752 34968083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2200 64 221 WRKY Transcription Factor Family AT4G12020 29.282 7.88e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2200 - - ahf:114924368 312.768