Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2189 AGCTTCTCGAGAATTCAAGAAGAAGAAGAAGAAGAAGGAGGAACAATGCAAGGTGGATTAGAGTTACCGCCAGGGTTCAGGTTTCACCCGAGCGACGAGGAATTGGTGAACCACTATCTCTGCAAGAAATGCGCAAAGCAATCAATTGCTGCTCCAATAATTAAAGAAATCGATTTGTACAAGTTCGATCCGTGGCAGCTTCCAGAGATGGCGTTGTACGGAGAGAAGGAGTGGTACTTCTTTTCGCCGAGGGATAGGAAATATCCGAACGGATCCCGGCCGAACCGGGCGGCTGGGAGCGGGTACTGGAAGGCGACCGGGGCGGATAAGCCGATAGGGAAGCCGAAGGCGTTAGGGATAAAGAAAGCGCTAGTGTTCTACGCCGGAAAGGCCCCGAAAGGAGTGAAGACTAATTGGATTATGCATGAGTACCGTCTCGCCAATGTTGACAGATCCGCCGCCAACAAACTCAACAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAATTCAACTCTGCCACAACAGGGTTGGAACAGAAACTACCAAAGTTTTCCCCAGGAGAGATACTTCACTATGATCATGATCATGAGCATGAGACAAAGCCAAAGATTATCCACAATTTCTCCAACAATGAGCACCAATTGTACATGGACACATCAGATTCCGTTCCAAGGCTGCACACGGACTCTAGCTGCTCGGATCACGCGGTTTCGCCGGACGCCACCTGCGACAAGGAGGTGGAGAGCAACCCAAAGTGGAGCAATGAGCTAGATATGCAGCTGTTTGATACCTTTGATTTTCAGCTCAACAACTATGATAATAACCTCCCAATGAATGATGATGACCTTTTTGGAAATCAGTTCCAAATGAATCAGCTCATGTCTTTCCAAGACACATTCTTGTTCCCACAAAAGCCATTTTGA 960 0.4729 SFSRIQEEEEEEGGTMQGGLELPPGFRFHPSDEELVNHYLCKKCAKQSIAAPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAANKLNNNNLRLDDWVLCRIYNKKGKIEKFNSATTGLEQKLPKFSPGEILHYDHDHEHETKPKIIHNFSNNEHQLYMDTSDSVPRLHTDSSCSDHAVSPDATCDKEVESNPKWSNELDMQLFDTFDFQLNNYDNNLPMNDDDLFGNQFQMNQLMSFQDTFLFPQKPF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2189 319 MobiDBLite consensus disorder prediction 239 261 - -
Amo08g2189 319 PANTHER NAC TRANSCRIPTION FACTOR 56 20 296 - -
Amo08g2189 319 ProSiteProfiles NAC domain profile. 22 175 IPR003441 GO:0003677|GO:0006355
Amo08g2189 319 SUPERFAMILY NAC domain 16 175 IPR036093 GO:0003677|GO:0006355
Amo08g2189 319 Pfam No apical meristem (NAM) protein 23 146 IPR003441 GO:0003677|GO:0006355
Amo08g2189 319 MobiDBLite consensus disorder prediction 1 23 - -
Amo08g2189 319 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 20 296 - -
Amo08g2189 319 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2189 Amo-Chr8 34861527 34862957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2189 20 319 NAC Transcription Factor Family AT1G01720 59.740 1.87e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo08g2189 NAM 1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2189 - - adu:107463232 635.565