Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2174 ATGGCGTTGATTCTGCATGCAGGTAAAACAAACAAAAATGCTTACAAGGCACTCATTGCAGCTGAGTATGTTGGTGTGCAAGTTGAGTTGGCCCCCAATTTTGAGATGGGTGTCTCTAACAAAACTCCAGAGTTTCTCAAGATGAATCCGATTGGCAAGGTTCCGGTGTTAGAGACACCAAAGGGCCCTGTATTTGAGAGCAATGCAATTGCTCGTTATGTTGCTCGTTTAAAGGGGGACAACAGTTTATATGGTTCCTCGCCTATTGATTATGGCCACATCGAGCAATGGATTGATTTTTCATCAATGGAGATTGATGCTAATATTAGTAGGTGGTTCTACCCGAGATTGGGATTTCTTCCTTACCTTCCTCCAGTTGAGGAGGCCGCAATTTCTGGACTGAAGAGAGCTTTGGGTGCTTTGAACACTCACCTTACTTCCAATACTTACCTAGTTGGGCATTCAGTGACCCTAGCTGACATCATAACAACATGCAATTTGTATTTGGGTTTCAGTCATATCTTGGTTAAGAGTTTCACTTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCATGGTTAATCAGCCAAACTTTCGAAAGATACTAGGTGAAGTCAAGCAGACTGAAGCTGTTCCACCTGTTCCATCTGCAAAGAAGCCTTCCCAGCCAAAAGAATCTAAGCCCAAGGCGAAGAACGAGCCAAAGAAAGAAGCAAAGAAAGAGCCAGAGAAACCCAAAGTAGAGGAGGAGGAGGAGGAAGAGGCTCCCAAGCCCAAAGCCAAGAATCCCCTTGATCTTCTTCCTTCAAGTAAGATGATACTAGATGAGTGGAAAAGGCTGTACTCCAACACCAAAACCAATTTCCGCGAGGTTGCAATAAAAGGATTTTGGGACATGTATGATCCAGAGGGATACTCTTTGTGGTTCTGTGATTACAAATACCAAGAGGAGAACACTGTTACCTTTGTGACAATGAACAAGGTTGGTGGTTTTCTTCAGCGGATGGATTTAGCTCGAAAGTATGCATTTGGAAAAATGCTTGTAATTGGATCACAACCACCCTTCAAGGTGAAGGGGTTGTGGCTTTTCCGTGGGCCGGAAATTCCGAAGTTTGTGCTTGATGAATGCTATGATATGGAGCTTTATGAATGGACTAAGGTTGACATATCTGATGAAAATCAGAAGGAGCGGGTCAATCAGATGATTGAAGATGCCGAACCGTTCGAGGGAGAGCCTCTTTTGGATGCTAAGTGCTTTAAGTGA 1266 0.436 MALILHAGKTNKNAYKALIAAEYVGVQVELAPNFEMGVSNKTPEFLKMNPIGKVPVLETPKGPVFESNAIARYVARLKGDNSLYGSSPIDYGHIEQWIDFSSMEIDANISRWFYPRLGFLPYLPPVEEAAISGLKRALGALNTHLTSNTYLVGHSVTLADIITTCNLYLGFSHILVKSFTSEFPHVERYFWTMVNQPNFRKILGEVKQTEAVPPVPSAKKPSQPKESKPKAKNEPKKEAKKEPEKPKVEEEEEEEAPKPKAKNPLDLLPSSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYQEENTVTFVTMNKVGGFLQRMDLARKYAFGKMLVIGSQPPFKVKGLWLFRGPEIPKFVLDECYDMELYEWTKVDISDENQKERVNQMIEDAEPFEGEPLLDAKCFK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2174 421 Gene3D - 80 213 - -
Amo08g2174 421 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 261 421 IPR001662 GO:0003746|GO:0006414
Amo08g2174 421 MobiDBLite consensus disorder prediction 210 266 - -
Amo08g2174 421 CDD GST_N_EF1Bgamma 5 77 - -
Amo08g2174 421 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Amo08g2174 421 SUPERFAMILY eEF1-gamma domain 262 421 IPR036433 GO:0003746|GO:0006414
Amo08g2174 421 PANTHER - 1 421 - -
Amo08g2174 421 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Amo08g2174 421 Gene3D Glutaredoxin 1 74 - -
Amo08g2174 421 CDD GST_C_EF1Bgamma_like 90 210 - -
Amo08g2174 421 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Amo08g2174 421 SMART EF1G_2 260 368 IPR001662 GO:0003746|GO:0006414
Amo08g2174 421 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Amo08g2174 421 Pfam Glutathione S-transferase, C-terminal domain 128 197 IPR004046 -
Amo08g2174 421 SFLD Glutathione Transferase (cytosolic) 5 193 IPR040079 -
Amo08g2174 421 MobiDBLite consensus disorder prediction 223 261 - -
Amo08g2174 421 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Amo08g2174 421 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 421 IPR044628 GO:0004364
Amo08g2174 421 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 261 421 IPR036433 GO:0003746|GO:0006414
Amo08g2174 421 SFLD Main (cytGST) 5 193 - -
Amo08g2174 421 Pfam Elongation factor 1 gamma, conserved domain 260 367 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2174 Amo-Chr8 34678245 34681315 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2174 1 421 Eukaryotic Initiation Factors Gene Family AT1G57720 75.772 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2174 K03233 - gmx:100795680 694.886