Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2133 ATGTTCGCTGAAGAGAATGGCCTCAAGGGTGACCCAAGGCTTCAAGCCATTTCTCAAGCCATCAGAGTCGTTCCTCACTTCCCCAAACAAGGAATAATGTTTCAGGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAGGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAGTGGAAGCTAGGGGATTCTTGTTTGGTCCCTCAATTGCATTGGGGATTGGTGCAAAATTTGTTCCTTTACGCAAACCAAGGAAGCTGCCAGGCGAAGTAATATCAGAAAAGTATTCTCTAGAATACGGAACTGATTGTTTGGAGTTACATGTTGGTGCTGTCCAGCCGGGTGAACGAGCCATAGTTATCGATGACTTGGTGGCCACAGGTGGAACTCTCTCGGCAGCAATAAGACTTCTAGAACGTTCTGGTGCTGAAGTAGTGGAATGTGCTTGTGTGATCGGTGTGCCGGATGTTAAGGGACACTGTAGGCTTATCGGAAAACCACTCTACGTCCTCGTTGAGCCACGTGAAGTAGATAAATGTTCCAGGTACTCGCCACTTTTTCCACCAAGAATGGTTGGCTTTGGAATGATTCCATTCATTCTGCTCCATGCTTTGTGTCTGAAAGATTTCAAACACCTTTTATTTTTTTCTAAAGCCTTTGGAGTCTTATTGGCACCTTTTTATGGCAATTGCTTCCAGAATTACTAG 738 0.4499 MFAEENGLKGDPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGVEARGFLFGPSIALGIGAKFVPLRKPRKLPGEVISEKYSLEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAAIRLLERSGAEVVECACVIGVPDVKGHCRLIGKPLYVLVEPREVDKCSRYSPLFPPRMVGFGMIPFILLHALCLKDFKHLLFFSKAFGVLLAPFYGNCFQNY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2133 245 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Amo08g2133 245 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Amo08g2133 245 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Amo08g2133 245 CDD PRTases_typeI 51 183 IPR000836 -
Amo08g2133 245 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 201 - -
Amo08g2133 245 TIGRFAM apt: adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Amo08g2133 245 Gene3D - 6 184 IPR029057 -
Amo08g2133 245 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2133 Amo-Chr8 34185663 34189244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2133 11 183 PRT Gene Family AT1G27450 72.254 6.14e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2133 K00759 - gmx:100499904 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2133 08 34185663 34189244 Amo18g3455 18 137619470 137623842 hybridization
Amo16g3652 16 147311194 147315240 Amo08g2133 08 34185663 34189244 PCT
Amo08g2133 08 34185663 34189244 Amo16g3652 16 147311194 147315240 PCT