Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2124 ATGGCCATTCTTTCTTTCATAGTGATTCTTGCTTACCTACTTTCTTCTTCCCTTGCCATAGAACTTGATTATATTCATGTTTCCAAGTCCCTCAGTGATGGCATGACCTTAGTGTCTCAAGGTGGAACCTTTGAACTCGGTTTCTTCAGCCCTGGTAAATCACAGAACCGTTACTTGGGGATTTGGTACAAGAAAATCCCAGTTCAGACAGTTGTTTGGGTTGCCAATCGGGCTAACCCCATTAATGGTTCCTCGGGAATATTAACATTGAACAGCACAGGCAATCTTGTGCTCAAAGAAAATGAAACTATTATTTGGAACACAGCCTCTCAAAAACAAGCAAAGAATCCAGTGTTAGAGCTCTTGGACGGTGGAAATCTTGTGCTAAGAAATGATGGAGATTCAAATCCAAAGGCCTATCTGTGGCAAAGCTTCGACTATCCATGCGATACACAATTGCCGGGGATGAAGACAGGAAGGGACCTGCAAAATGATTTTGATTGGCGAGTAACTTCTTGGAAGAGTCCAGATGATCCATCCCCTGGAGACCTTTCTTATGGTCTAGTACTAAGTGATTATGCTGAGTTTTCCATTATGAATGGAACGAAAAAGTTCTGTCGGATTGGACCTTGGAATGGCCTATACTTTGGGGGAGTCCCAAATATGAAGTATGAGTATATTTATGAACTCAGTTATGTCACCAACAAGGACGAGATATTCTACAGCTTTAGCACCAAGATTGATTCTCTCATCACAAGAGTTGTAATAAACCAAACAAGCGAACATGTTCTTACTCAATACGTCTGGGATGACAAAGTTCAGCATTGGAAACTTTTTGGATCACTTCCAGCTGATGTCTGTGATTATTATGGCTGCTGTGGAGCCTTTGGTTATTGCAGTGCAGCAGACACACATGTGTGCCAATGTTTGAAAGGGTTCAGTCCAAAGTCACCAAAAGCATGGAACTTATCCATCTGGACTCAAGGATGTATCCGCAATGAACCACTAAGTTGCAATGTCACAAGCAGTGATGGTTTTCTCAAATATACCGGCTTCAAAGAACCTGATACTCAACACACCAGGTTGTTTGAGAATATCACTTTAGAGGACTGTGAAGTTTTGTGCTTGAAGAATTGCTCTTGTATGGCTTATGCTAATTCTGACATAAGAGAAGGGGGCAGAGGATGTGTCATGTGGTTTGGTGATTTGATCGACCTAAAACTGCTTCAAGGCGGGAAACAAAGTCTATATATCAGAATGCCTGCTTCTGAGCTAGAAATTTCAAGATCACATAAGAAAAAAGTGATAATTTCTGCTACCATTGCTGCAACTTGTGGGATGCTTCTACTTTGTTATGTCATATACAAAGTCCGACGGAACATTGCTGAAAAGTCAAAAGCAGAATACTTTGAAGGATATGTAAACGACACAGATCTACCAATGTTTGATCTACTAATGATTAGTAATACCACTGATAACTTCTCGCTGAATAGCAAGATTGGACAAGGTGGTTTTGGAACTGTATATAAGGGGAAATTAGCAGATGGGCAAGAAATTGCTGTCAAGAGACTTTCACAGAGTTCTGGCCAAGGAATGACGGAATTTCTAACTGAAGTGAAGCTTATTGCAAAGCTTCAGCATCGAAATTTAGTAAAACTTCTTGGTTGCTGCATTCGAGGACAAGAAAAGTTGTTAGTTTATGAATACATGGTTAATGGCAGCCTAGACAACTTCATTTTTGTAAAATCCGACGTCTTCAGCTTTGGCGTAATATTGATGGAGATTATAAGTGGGAACAGAAATAGAGCGCTTTGTCATGCAAATGAGACTCTTAATCTTGTTGGCTATGCTTGGATGCTTTGGAAAGAGGACAGACCTTTGGAGCTGATTGATCCAAACATTAAGGAGTCGTGTGTCGTGGCAGAAGTATTGCGGTGCATCCATGTAAGTCTCTTATGTGTGCAACAACACCCGGAAGATCGGCCAACAATGGCCTCAGTACTTGTCATGTTAGGAAGTAAGATGGACTTAGTTGATCCTAAAGAGCCTGGCTTCTTTTCCTGCAAGCTCCCCACTGAAGTGAATTCACACTCAGATCAACATAACATCATCACTTTAAATGATGAATTAACTATTACCTCATTAGATGGTCGGTGA 2157 0.4084 MAILSFIVILAYLLSSSLAIELDYIHVSKSLSDGMTLVSQGGTFELGFFSPGKSQNRYLGIWYKKIPVQTVVWVANRANPINGSSGILTLNSTGNLVLKENETIIWNTASQKQAKNPVLELLDGGNLVLRNDGDSNPKAYLWQSFDYPCDTQLPGMKTGRDLQNDFDWRVTSWKSPDDPSPGDLSYGLVLSDYAEFSIMNGTKKFCRIGPWNGLYFGGVPNMKYEYIYELSYVTNKDEIFYSFSTKIDSLITRVVINQTSEHVLTQYVWDDKVQHWKLFGSLPADVCDYYGCCGAFGYCSAADTHVCQCLKGFSPKSPKAWNLSIWTQGCIRNEPLSCNVTSSDGFLKYTGFKEPDTQHTRLFENITLEDCEVLCLKNCSCMAYANSDIREGGRGCVMWFGDLIDLKLLQGGKQSLYIRMPASELEISRSHKKKVIISATIAATCGMLLLCYVIYKVRRNIAEKSKAEYFEGYVNDTDLPMFDLLMISNTTDNFSLNSKIGQGGFGTVYKGKLADGQEIAVKRLSQSSGQGMTEFLTEVKLIAKLQHRNLVKLLGCCIRGQEKLLVYEYMVNGSLDNFIFVKSDVFSFGVILMEIISGNRNRALCHANETLNLVGYAWMLWKEDRPLELIDPNIKESCVVAEVLRCIHVSLLCVQQHPEDRPTMASVLVMLGSKMDLVDPKEPGFFSCKLPTEVNSHSDQHNIITLNDELTITSLDGR* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2124 718 ProSiteProfiles Protein kinase domain profile. 494 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2124 718 Pfam PAN-like domain 338 406 IPR003609 -
Amo08g2124 718 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Amo08g2124 718 Gene3D Transferase(Phosphotransferase) domain 1 579 676 - -
Amo08g2124 718 Gene3D Phosphorylase Kinase; domain 1 455 569 - -
Amo08g2124 718 PIRSF SRK 579 718 IPR024171 GO:0004674
Amo08g2124 718 PIRSF SRK 1 582 IPR024171 GO:0004674
Amo08g2124 718 Pfam D-mannose binding lectin 70 174 IPR001480 -
Amo08g2124 718 ProSiteProfiles PAN/Apple domain profile. 338 422 IPR003609 -
Amo08g2124 718 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 179 IPR036426 -
Amo08g2124 718 CDD B_lectin 28 148 IPR001480 -
Amo08g2124 718 SMART blect_4 28 148 IPR001480 -
Amo08g2124 718 CDD PAN_AP_plant 335 421 - -
Amo08g2124 718 SUPERFAMILY Protein kinase-like (PK-like) 479 686 IPR011009 -
Amo08g2124 718 Gene3D Hepatocyte Growth Factor 337 418 - -
Amo08g2124 718 Gene3D - 19 145 IPR036426 -
Amo08g2124 718 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Amo08g2124 718 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 581 716 - -
Amo08g2124 718 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 13 580 - -
Amo08g2124 718 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Amo08g2124 718 Pfam Protein tyrosine and serine/threonine kinase 495 579 IPR001245 GO:0004672|GO:0006468
Amo08g2124 718 SMART ntp_6 341 420 IPR003609 -
Amo08g2124 718 PANTHER - 581 716 - -
Amo08g2124 718 PANTHER - 13 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2124 Amo-Chr8 34085518 34088836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2124 454 718 Receptor kinase-like Gene Family AT4G23280 32.710 4.11e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g2124 S_locus_glycop 2.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2124 - - aip:110265385 834.328