Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2123 ATGGAATCTTCTCTTATTAGCTCTCTACTATTTTGGTATCTCCTTCTCTTACTTGTTGGATTCATCACACCATTTCTCAAATTCCTCAAACACCAAATAACTTCAAAATGCAAACAAACTACATCACTCCCTCCGGGACCAAAACCATGGCCTATAATTGGTAACCTACCTGAAATGCTAGCAAACAAACCAACATCTACATGGATACATAGGATCATGAGTGACCTAAACACCGAAATCGCATGCATTCGGCTAGGTAACATTCATGTCATTCCGATTACTAGCCCTGAAATTGCTCGGGAATTATTGACAAAACAAGATTCAATTTTCGCGTCCAGGCCTACGAATTGGTCTAGTGAACATGTCTCGTTTGGGTACTTGAGTACAATAGTAGTGCCCTATGGAGAACAATGGAAGAAAATGAAGAGAGTCATGGCCAATGAATTGGTCTCTCCAAGAAGACTTCAATGGCTACAAGACAAGAGGGTGGAGGAAGCCGACAACATCGTTCGCTATGTTTACAATCAATGCAATAAGAATGGCGGCGGCCTTGTTGATGCGAGGATTGTTGCACGACATTATTCAGGGAACATCATTAGAAGGTTGGTTTTCAATGCAAGGCACTTTGGTAAAGGAACAGAAGATGGAGGACCCGGATTTGAGGAGGTGGAACATATTGATGCAATTTTCATTGTTTTGAGATACCTCTTTGCATTCTCTGTCTCTGATTACGTTGCATGCTTGAGAGGGCTTGACTTGGATGGTCATAAGAAGAACTTGAAGAAGGCCACTAAGTTGATAATGAAGTATCATGATCCCTTAATTGAAGATAGGGTTCAGCAATGGAAGAATGGTAAAAGGACATGTGAAGAGGACTTGCTTGATGTTTTAATCTCATTGAAAGATGCAAATGACAGTCCACTTTTGACTCTTGATGAAATTAAGTCTCAAATTATGGATATGATGATTGCAACCGTGGACAATCCATCAAATGCATTTGAATGGGGACTCGCCGAGATGCTAAATCAGCCGGAGATGCTTGAAAAGGCGACGGAGGAATTAGATAGCGTGGTTGGCAAAAAAAGACAAGTACAAGAATCAGACATTCCAAAACTCAAGTACGTGAAAGCATGCGCAAGAGAAGTATTTCGCCTCCACCCTATTGATGACATCAACGCCACCCATGTTTCCATGGAAGACACATTTGTTGCCAACAACACCTACTTCATTCCAAAGGGTAGCCACATCGTTCTAAGACGGCAAGGAATCGGACAAAATCCAAGAATATGGAAAGACCCATTGAGGTTTCAACCCGAACGCCATTTAGAAAAAGATAATAATATTGATGGGTTTAAGAATATGAGTTTAAATGAACCGAGTTTGAAGTTGATTACGTTTAGCACTGGAAGACGTGCATGTCCCGGGATCAATCTTGGTTCTACCATGACGGTTATGTTATTTGCTAGGATGTTGCATGGCTTCAATTGGAGTGTGCCACCCAATGAGACAACCATTGACCTCTCCGAAATAAAAGGAGGTACCATAAAAGCAAAGCCACTCGTGGCACTTGCAACGCCGCGGTTGCCAGCCGAGGCTTATGGAATTTTTTAA 1611 0.4178 MESSLISSLLFWYLLLLLVGFITPFLKFLKHQITSKCKQTTSLPPGPKPWPIIGNLPEMLANKPTSTWIHRIMSDLNTEIACIRLGNIHVIPITSPEIARELLTKQDSIFASRPTNWSSEHVSFGYLSTIVVPYGEQWKKMKRVMANELVSPRRLQWLQDKRVEEADNIVRYVYNQCNKNGGGLVDARIVARHYSGNIIRRLVFNARHFGKGTEDGGPGFEEVEHIDAIFIVLRYLFAFSVSDYVACLRGLDLDGHKKNLKKATKLIMKYHDPLIEDRVQQWKNGKRTCEEDLLDVLISLKDANDSPLLTLDEIKSQIMDMMIATVDNPSNAFEWGLAEMLNQPEMLEKATEELDSVVGKKRQVQESDIPKLKYVKACAREVFRLHPIDDINATHVSMEDTFVANNTYFIPKGSHIVLRRQGIGQNPRIWKDPLRFQPERHLEKDNNIDGFKNMSLNEPSLKLITFSTGRRACPGINLGSTMTVMLFARMLHGFNWSVPPNETTIDLSEIKGGTIKAKPLVALATPRLPAEAYGIF* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2123 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Amo08g2123 536 Pfam Cytochrome P450 44 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 532 - -
Amo08g2123 536 Coils Coil 347 367 - -
Amo08g2123 536 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 12 532 - -
Amo08g2123 536 SUPERFAMILY Cytochrome P450 44 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo08g2123 536 Gene3D Cytochrome P450 36 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2123 Amo-Chr8 34071936 34075288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2123 5 533 Cytochrome P450 AT5G05260 51.124 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2123 - K12153 gmx:100809902 664.455