Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2122 ATGGCTTCATCACACATAATTAACAATGATCTCAAAGCATCAAATGAGATCTTTGAAGGTCAAGTTCAGTTGTACAAACACATGTTTGCATTCTTAGACTCTCTTTGCCTTAAGTGGTGTGTGGATCTAAGCATACCAAACATAATCCACAACCATGGTCAACCTATGACTCTTCATGAGTTGGTTTCCAAGTTACAAGTTCCATTAACTAAGGTTAGTGGTGTGCACCGTTTAATGCGTTATCTTGCACACATTGGATTCTTTGACATAGTAAGAATTACCCAAGAATATCAAGAAGAAAAGGAAGCATATGCTCTTACGTATGTATCAAAGCTCCTTGTTAGAGGTAGTGATCATTGTTTAGCTCCAATGGTTGACCTTATTCTTGACCCAACTATCTCAAGTTCATACCAACAACTTGGGAAGTGGGTTCATGATGAGGGGAATCAAACACCATTTGCCATGGCATTGGGTACAGGTATTTGGGACTTCCTCAACAAAAACCCTACACATATGAAATTACTTCAAAATCATGGTGTTGTCTTTGAAGGGTTGGAATCAATTGTAGATGTTGCTGGAGGAACTGGAATGGTAGCCAAGTATATCTCTGAAACTTTTCCACATTTGAAATGCATAGTTTTTGATCTTCCACAGGTTGTGAAAAATCTTAAAGGGACCAACAATTTGACTTATGTTGGTGGGGACATGTTTCAATCTATCCCTAAAGCTGATGCAGTTCTACTTAAGTGGATTTTACATGATTGGGATGATGATAATTGCATAAAGATATTGAAAAAATGCAAAGACGCTGTTTCTTCAAATATTGTGATAGATGATGAAAAAAAAGATGAGCCTGAAATTACCCAAGCAAAGCTTCAATTGTTTAGTGAACCAAAGCAAGAATGGAAGAAACTCTTCATGGAAGCAGATTGTCATCAAGACTACAAAATTTCACCTTTAACTGGACATATGTCTCTTATTGAGATATATATTTAA 996 0.3655 MASSHIINNDLKASNEIFEGQVQLYKHMFAFLDSLCLKWCVDLSIPNIIHNHGQPMTLHELVSKLQVPLTKVSGVHRLMRYLAHIGFFDIVRITQEYQEEKEAYALTYVSKLLVRGSDHCLAPMVDLILDPTISSSYQQLGKWVHDEGNQTPFAMALGTGIWDFLNKNPTHMKLLQNHGVVFEGLESIVDVAGGTGMVAKYISETFPHLKCIVFDLPQVVKNLKGTNNLTYVGGDMFQSIPKADAVLLKWILHDWDDDNCIKILKKCKDAVSSNIVIDDEKKDEPEITQAKLQLFSEPKQEWKKLFMEADCHQDYKISPLTGHMSLIEIYI* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2122 331 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 331 IPR016461 GO:0008168
Amo08g2122 331 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 12 330 - -
Amo08g2122 331 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 328 IPR029063 -
Amo08g2122 331 Pfam Dimerisation domain 36 83 IPR012967 GO:0046983
Amo08g2122 331 Pfam O-methyltransferase domain 137 273 IPR001077 GO:0008171
Amo08g2122 331 PANTHER O-METHYLTRANSFERASE 12 330 IPR016461 GO:0008168
Amo08g2122 331 Gene3D - 7 113 IPR036388 -
Amo08g2122 331 Gene3D Vaccinia Virus protein VP39 115 330 IPR029063 -
Amo08g2122 331 PIRSF O-mtase 170 331 IPR016461 GO:0008168
Amo08g2122 331 PIRSF O-mtase 2 178 IPR016461 GO:0008168
Amo08g2122 331 SUPERFAMILY "Winged helix" DNA-binding domain 14 117 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2122 Amo-Chr8 34063335 34066328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2122 35 271 Monolignol Biosynthesis Gene Families AT5G54160 31.765 1.81e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2122 K22588 - gmx:100813225 371.703