Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2121 ATGGGCATTCCTTCTTTCACAGTGATGCTTGCTTACATGCTTTCTTCTTCTTCTCTTGCCATAGAACTTGATTCTCTTCATGTTTCCCAGTCCTTCAGTGATGGCATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGTAACTCTTCACACAAGCGTTACTTGGGAATTTGGTACAAGAAAATTCCAATTCAGACAGTTGTTTGGGTTGCCAATAGGGTCAACCCCATCAATGGTTCCTTAGGAACTTTAACAATTAACAGCACAGGCAATCTTTTACTCACAGAAAATGGCACTGAGACTACTGTTTGGAGCACAAGCACAATCTCTCAAAAACAAGCAAAGAATCCGGTATTGAAGCTCTTGGACAGTGGCAATCTTGTGTTAAGAAATGAAGGGGAATCAAATCCAAAGGCCTATTTGTGGCAAAGCTTTGATTATCCTACAGATACATTCTTGCCAACCATGAAGTTGGGAAGGGACCTCCGAAAAGGTTTGGATTGGCGCATAACTTGTTGGAAGAGTCCAAATGATCCATCCCCTGGAGACTTTTCTCTTGGTTTAGTTGTAAGGGATTATCCAGTCTATTACATGATGAATGGCACACAAAAAGTATATCGGTCTGGACCTTGGAATGGCCTTTACTTCAGTGGATTCCCAGATCTGTCCTTTACATATGTTTTTGAAGACAGTTTTGTCACAAACAAGGATGAGATATCCTATAGTTATAACACCAAGGTTGATTCTATCATTGGAAGAGGTGTAATAAGCCAAACAAGTCAATCTCTTACAAGTTATTTATGGGATGACAATCTTCAGAATTGGAAAGTTTCTGCATCAACGCCAGGTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTATGCTTATTGCAGTGTAGCAGAATCACAGCATCTCTGCCAATGCTTTAAAGGGTTTAGTCCAAAGTCACCAGAAGAATGGAACTCAAACAACTCCTCACAAGGATGCATTCGCGACGATCCATTAAGCTGCAATGTCACAAGCACTGATGTGTTTGTGAAATATACAGGCTTGAAAGTGCCAGATACTCAGCATACTAAGCTGCATGAGAATATTAATTTAGATGAATGCAGAAATCTGTGTTTGAAGAACTGCTCTTGTATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGCCATGTGGTTCGGCGATCTAATTGACATCAAACTGTTTCAAAATGGTGGACAAGATCTATACATCCGAATGCCTGCTTTTGAGTCAGGACTTCAACATCGGCACAAGCAAAAAGTGATCATTGCTAGCACCATTGTTGCATTTTGTGCAACACTTCTACTTTGTGTTTATAAATATAATAACAAAAAATCAAATATAGAAGAATATGTAAATGATACAGATCTACCATTATTTGATCTACTAACAATTACTACTGCCACGCACAAGTTCTCGTTGAATAACAAGATTGGACAAGGCGGTTTTGGACCTGTTTATAAGGGAAAATTAGCAGATGGTCTTGAAATTGCTGTGAAGAGACTCTCACATAGCTCTACACAAGGAATGACTGAATTCATAACTGAAGTAAAGCTAATAGCGAAACTTCAGCACCGTAATCTAGTAAAACTTCTTGGTTGTTGCATTCAAGGAGAAGAAATTTTGTTAGTTTATGAATATGTGGTTAATGGGAGCCTAGACACCTTCATCTTTGATAAAACAAAAAGCAAGATGTTGGATTGGTCTCAGCGCTTGGGCATAATATTTGGAATTACTAGGGGACTCTTGTATCTTCATCAAGATTCAAGATTGAGAATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTACTTGATGACAAATTAAACCCAAAAATATCAGATTTTGGAATGGCCAGGACTTTTGGAGGAGATCAAACCGAAGGAAACACAAATAGAGTCGTGGGGACTTATGGATACATGGCTCCAGAATATGCTATCGACGGTTTGTATTCTATAAAATCCGATGTCTTCAGCTTTGGCATACTTATGATGGAAATTATATGTGGGACTAAAAACAGAGCTCTTTGTCATGCAAATGAAACTCTCAACCTCATTGGCTATGCTTGGAGGCTATGGAAAGAGGACAAAGCTTTAGAGTTGATAGATTCAAGCATAAAGGAGTCATGTGTAATCTCAGAAGTAATGCGTTGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCTGAGGATAGGCCTACAATGGCTTCTGTGCTTCTCATGTTAGCAAGTGAGATGGATTTAGATGAGCCTAAAGAGCCTGGCTTCTTTCCCAAGTGGGTCTCTATGGAAGCGAATTCGCAGCCACATCAATGTGAACTATCTTATGATGAATTAACCGTTACTTCATTAGATGGCCGGTGA 2427 0.3956 MGIPSFTVMLAYMLSSSSLAIELDSLHVSQSFSDGMTLVSQGGKFELGFFSPGNSSHKRYLGIWYKKIPIQTVVWVANRVNPINGSLGTLTINSTGNLLLTENGTETTVWSTSTISQKQAKNPVLKLLDSGNLVLRNEGESNPKAYLWQSFDYPTDTFLPTMKLGRDLRKGLDWRITCWKSPNDPSPGDFSLGLVVRDYPVYYMMNGTQKVYRSGPWNGLYFSGFPDLSFTYVFEDSFVTNKDEISYSYNTKVDSIIGRGVISQTSQSLTSYLWDDNLQNWKVSASTPGDVCDKYDLCGAYAYCSVAESQHLCQCFKGFSPKSPEEWNSNNSSQGCIRDDPLSCNVTSTDVFVKYTGLKVPDTQHTKLHENINLDECRNLCLKNCSCMAYANSDIRGGGSGCAMWFGDLIDIKLFQNGGQDLYIRMPAFESGLQHRHKQKVIIASTIVAFCATLLLCVYKYNNKKSNIEEYVNDTDLPLFDLLTITTATHKFSLNNKIGQGGFGPVYKGKLADGLEIAVKRLSHSSTQGMTEFITEVKLIAKLQHRNLVKLLGCCIQGEEILLVYEYVVNGSLDTFIFDKTKSKMLDWSQRLGIIFGITRGLLYLHQDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILMMEIICGTKNRALCHANETLNLIGYAWRLWKEDKALELIDSSIKESCVISEVMRCIHVSLLCVQQYPEDRPTMASVLLMLASEMDLDEPKEPGFFPKWVSMEANSQPHQCELSYDELTVTSLDGR* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2121 808 CDD B_lectin 29 154 IPR001480 -
Amo08g2121 808 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 33 807 - -
Amo08g2121 808 Pfam PAN-like domain 344 412 IPR003609 -
Amo08g2121 808 CDD STKc_IRAK 498 763 - -
Amo08g2121 808 SMART blect_4 29 154 IPR001480 -
Amo08g2121 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Amo08g2121 808 Pfam S-locus glycoprotein domain 212 323 IPR000858 GO:0048544
Amo08g2121 808 Pfam Protein tyrosine and serine/threonine kinase 493 760 IPR001245 GO:0004672|GO:0006468
Amo08g2121 808 Pfam D-mannose binding lectin 72 180 IPR001480 -
Amo08g2121 808 ProSiteProfiles EGF-like domain profile. 288 325 IPR000742 -
Amo08g2121 808 Gene3D Hepatocyte Growth Factor 343 423 - -
Amo08g2121 808 Gene3D Phosphorylase Kinase; domain 1 456 567 - -
Amo08g2121 808 SMART serkin_6 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2121 808 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 807 - -
Amo08g2121 808 SUPERFAMILY Protein kinase-like (PK-like) 466 763 IPR011009 -
Amo08g2121 808 Gene3D - 19 151 IPR036426 -
Amo08g2121 808 ProSiteProfiles Bulb-type lectin domain profile. 23 148 IPR001480 -
Amo08g2121 808 Gene3D Transferase(Phosphotransferase) domain 1 568 774 - -
Amo08g2121 808 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Amo08g2121 808 CDD PAN_AP_plant 341 427 - -
Amo08g2121 808 ProSiteProfiles Protein kinase domain profile. 492 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2121 808 PIRSF SRK 2 808 IPR024171 GO:0004674
Amo08g2121 808 SMART ntp_6 347 426 IPR003609 -
Amo08g2121 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2121 Amo-Chr8 34059122 34062162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2121 441 780 Receptor kinase-like Gene Family AT4G23190 52.975 8.77e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g2121 PK_Tyr_Ser-Thr 9.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2121 - - aip:110265385 1399.42