Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g2119 | ATGGCCAGAACTTTTGGAGGAGATCAAACGGAAGGAAACACAAATAGAGTTGTTGGAACTTATGGGTACATGGCACCAGAGTATGCTATCGATGGGCTATATTCTATAAAATCCGATGTCTTCAGCTTTGGCATACTTATGATGGAAATTATATGTGGAACCAAAAATAGAGCTCTTTGCCATGCAAATCAGACCCTTAATCTCATTGGTTATGCTTGGAGGCTATGGAAAGAGGAGAAGGCTTTAGAGTTGATAGATTCAAGCATAAAGGAGTCATGTGTAATCTCAGAAGCATTGCGAGGCATCCATGTGAGTCTGTTGTGTGTGCAACAATACCCTGAAGATAGGCCTACAATGGCTTCTGTGATTCTCATGTTAGGAAGTGAGATAGATTTAGTTGAGCCTAAAGAGCCCGGCTTCTTTCCCAAGAGGGTTTCTATCGAAGCGAATTCGCAGCTACATCAATGTGAAGTATCTACAAATGATGAATTAACTGTTACCTCATTAGATGGCCGGTGA | 519 | 0.4143 | MARTFGGDQTEGNTNRVVGTYGYMAPEYAIDGLYSIKSDVFSFGILMMEIICGTKNRALCHANQTLNLIGYAWRLWKEEKALELIDSSIKESCVISEALRGIHVSLLCVQQYPEDRPTMASVILMLGSEIDLVEPKEPGFFPKRVSIEANSQLHQCEVSTNDELTVTSLDGR* | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g2119 | 172 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 1 | 171 | - | - | |
Amo08g2119 | 172 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 1 | 171 | - | - | |
Amo08g2119 | 172 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 135 | - | - | |
Amo08g2119 | 172 | Pfam | Protein tyrosine and serine/threonine kinase | 8 | 123 | IPR001245 | GO:0004672|GO:0006468 | |
Amo08g2119 | 172 | ProSiteProfiles | Protein kinase domain profile. | 1 | 140 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo08g2119 | 172 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 152 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g2119 | Amo-Chr8 | 34048507 | 34049469 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g2119 | 1 | 167 | Receptor kinase-like Gene Family | AT4G23150 | 47.024 | 1.51e-49 | 167 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Amo08g2119 | PK_Tyr_Ser-Thr | 1.2e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g2119 | - | - | aip:107612694 | 348.591 |