Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2118 ATGGATATTCTTAACTCAATGATTATCGTTGCTTACTTATTACTTGTTTCCTCTGTCACAGTTTCCTCTGCCAAAGTTTCCTCTGTCACAGTTTCCATGGCAGTCAATGATTCAATAGGTATGTCCAAGTCTATCAGTGATGATGGCAATGACAAAACCATAGTATCCAAAGATGGAGTATTTGAGCTTGGCTTCTTCAGCCCCGGCAGTTCAATGAAGCGTTACCTGGGGATTTGGTATAAGAAAAGTTCCATGTATACTGTTGTTTGGGTTGCCAACAGGGACAAACCCATCGATTTTGTCTCAGCTGGAATATTAACATTGGACATCACTGGGAATCTTATCCTTACCCAAAATGATTCTGTTGTTTGGAGCACAAACTCTCAAAGACAAGCACAGAATCCAGTGGCACAGCTCATGGACAGCGGCAATCTTGTGGTATGGAATGATGGGGGTCCAAACTCAGAAGACATTTTGTGGCAAAGCTTTGACTATCCGTCGGATACGATATTGCCGGGAATGAAGGTGGGATGGGACCTCAAACGAGGTCTCGAATGGCGAATAACATCTTGGAAGAGTCCAAATGATCCAGCTCCTGGAGATTTCTCATGGGGTTTAGTGCTCAACGAATATCCTGACTTTTATATGAAAGGACGAACAAGGCTCAACCGGTTTGGACCATGGAATGGCCTTTATTTCAGTGGCTTCCGAGATCAAAATCCAAGCTCTGTTTATGAATTCACATATGTCACTAGCTATGATGCCAAGTTTCCCTCCAATAAGGATGAGATTTACTACACGTATACTTTAAAGAATACTTCTATCTTGTCGAGAGTCCACCTAGACCAAACTGGTGGCTTTCATTTCTATATTTGGGCAGAAGAAGATCAGCAATATTGGGAGCTCTATGAGATGTACTCATCCAGAGACCAGTGTGATAATTATGGCGTTTGCGGGTCAAACTCAAAATGCTTAATTGATGAATCACCAATGTGCCAATGTTTAGAAGGTTTCAGTCCCAAGTCACCACAAGAATGGGATATGAGGAATTGGACAAAAGGATGTGTCCGGACTAAACCCTTAACCTGCAATGACATTTCCATCAATGACATTTTTGTCAAATTTGTAGCCTTGAAGGTTCCAGATACTACACATACATGGTTGGATGAGAATATAGGTCTAGATGAATGCAGAGCAAGGTGCTTGAATAACTGCTCTTGTATGGCCTTTAGTAACTCTGATATAAGAGGATCATGTAGTGGTTGTGTTTTATGGTTTGGTGATCTTATTGACATGAGACAGTTCAATACTAAACAAACTCGTGAGCAAGATCTATATATTCGTATGGCTAATGCTGAGTCTCAAAGTGAGAGCAAGATGAACATAAGAACTATAGTTGCTATAACTATTCCAACATTATGTGGGGTGCTTTTACTCTCTGTTTATGTTGTCTACAGAATCCGAAGGAACCTTGTTGAGAAGTCAATGGTCAGAGATAACATTGAAAAACATGTAGAGGATCTCCCGTTGTTTGCTCTGCCGACAATTAGTATGGCCACTAGCAACTTCTGGATAGAGAATAAGATTGGACAAGGCGGTTTTGGACCTGTATATAAGGGAAAATTATCAGATGGGCGACAAATTGCTGTAAAGAGACTTTCAAGGAGCTCTGGACAAGGAGTGACCGAGTTCATAAATGAAGTAAAACTGATTGCTAAACTTCAGCATAGAAATCTTGTAAGGCTTCTTGGTTGTTGCATTCAAGGACAAGAGAAGCTACTAATTTATGAATACATGGCTAATGGTAGCTTAGACTCCTTTATTTTTGATCACACCAAAGGGAAATTGCTGAGTTGGCCTCATCGCTTCCACATTATACTTGGAATTGCTAGGGGGCTTCTATATCTTCATCAAGATTCCCGATTAAGGATAATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAAGCTGAATTCAAAAATATCTGATTTTGGAATGGCTAAAGCTTTTGGAGGTGATCAAACAGAAGGAAACACAGATAGAGTAGTTGGAACTTACGGATATATGGCACCGGAATATGCGGTGGATGGATTATTTTCTGTAAAATCCGACGTCTTTAGCTTTGGCATTTTATTGTTAGAGATTATATGTGGAAGCAAGAACAGAGCTCTTTCTTATGCAAATAACACATACAACCTCGTTGGTTATGCATGGACACTTTGGAAGGAGGGCAATGCGTTGCAATTAATTGACTCCAACATTAAGGATTCATGCATTGACTCAGAAGTATTGCGTTGCATCCAAGTTAGTCTAGTTTGTATGCAACATTACCCAGAGGATAGGCCTACCATGACATCAGTGATTCGAATGTTGGATAGTGAGATGGAATTGGTTGATCCTAAAGAGCCTGGTTTCTTTCCAAGGAAGGTTTCCAATGAAGCCACAAATCAAAATGAAATAAGCTTAAACAATGAGATAAGTGTGACCTCTTTAGATGGACGTTGA 2514 0.4006 MDILNSMIIVAYLLLVSSVTVSSAKVSSVTVSMAVNDSIGMSKSISDDGNDKTIVSKDGVFELGFFSPGSSMKRYLGIWYKKSSMYTVVWVANRDKPIDFVSAGILTLDITGNLILTQNDSVVWSTNSQRQAQNPVAQLMDSGNLVVWNDGGPNSEDILWQSFDYPSDTILPGMKVGWDLKRGLEWRITSWKSPNDPAPGDFSWGLVLNEYPDFYMKGRTRLNRFGPWNGLYFSGFRDQNPSSVYEFTYVTSYDAKFPSNKDEIYYTYTLKNTSILSRVHLDQTGGFHFYIWAEEDQQYWELYEMYSSRDQCDNYGVCGSNSKCLIDESPMCQCLEGFSPKSPQEWDMRNWTKGCVRTKPLTCNDISINDIFVKFVALKVPDTTHTWLDENIGLDECRARCLNNCSCMAFSNSDIRGSCSGCVLWFGDLIDMRQFNTKQTREQDLYIRMANAESQSESKMNIRTIVAITIPTLCGVLLLSVYVVYRIRRNLVEKSMVRDNIEKHVEDLPLFALPTISMATSNFWIENKIGQGGFGPVYKGKLSDGRQIAVKRLSRSSGQGVTEFINEVKLIAKLQHRNLVRLLGCCIQGQEKLLIYEYMANGSLDSFIFDHTKGKLLSWPHRFHIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDDKLNSKISDFGMAKAFGGDQTEGNTDRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGSKNRALSYANNTYNLVGYAWTLWKEGNALQLIDSNIKDSCIDSEVLRCIQVSLVCMQHYPEDRPTMTSVIRMLDSEMELVDPKEPGFFPRKVSNEATNQNEISLNNEISVTSLDGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2118 837 PIRSF SRK 5 837 IPR024171 GO:0004674
Amo08g2118 837 Gene3D Transferase(Phosphotransferase) domain 1 599 804 - -
Amo08g2118 837 Gene3D - 31 163 IPR036426 -
Amo08g2118 837 SMART ntp_6 367 449 IPR003609 -
Amo08g2118 837 CDD B_lectin 49 166 IPR001480 -
Amo08g2118 837 SMART serkin_6 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2118 837 CDD STKc_IRAK 529 795 - -
Amo08g2118 837 ProSiteProfiles PAN/Apple domain profile. 363 450 IPR003609 -
Amo08g2118 837 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 48 836 - -
Amo08g2118 837 SUPERFAMILY Protein kinase-like (PK-like) 507 821 IPR011009 -
Amo08g2118 837 CDD PAN_AP_plant 360 450 - -
Amo08g2118 837 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672|GO:0006468
Amo08g2118 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Amo08g2118 837 SMART blect_4 45 166 IPR001480 -
Amo08g2118 837 ProSiteProfiles Protein kinase domain profile. 523 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2118 837 Pfam D-mannose binding lectin 87 192 IPR001480 -
Amo08g2118 837 ProSiteProfiles Bulb-type lectin domain profile. 30 160 IPR001480 -
Amo08g2118 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 48 836 - -
Amo08g2118 837 Gene3D Phosphorylase Kinase; domain 1 497 598 - -
Amo08g2118 837 ProSiteProfiles EGF-like domain profile. 308 344 IPR000742 -
Amo08g2118 837 Pfam PAN-like domain 368 432 IPR003609 -
Amo08g2118 837 Pfam S-locus glycoprotein domain 224 342 IPR000858 GO:0048544
Amo08g2118 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 197 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2118 Amo-Chr8 34024954 34028192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2118 465 811 Receptor kinase-like Gene Family AT4G23190 51.841 1.03e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo08g2118 PK_Tyr_Ser-Thr 5.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2118 - - gmx:100812007 1053.51