Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2106 ATGATGAGAAATCATTGGTCTTTCTTTCAAATTATGGGTACCTTGGTGTTATTGGTTATCATGCTTTTGTGTGAAGTGTGTTTGGGAGGTGTCCAATTTGTTGGTAAGGTGTATCCAGGATCCATCAAAGGTGCTCAAATGAACTGGGTTGATAAGGATGGCAAGTTCCTTGCATCAAGCAGTGGGAAATTCACCTTTGGATTTGCCACCACTGCTGATGATAATACAAAGTTCCTAGTAGTGATTGTTCATGTKAAGAGCAACACTCTGATCTGGACTGCRAATCGAGCAGTCCCCRTTGYAAATACTGACRAATTTGARTTTGATGAARAGGGAAATGTCGTCTTGAATAAGGGTGAAACMGTTGTGTGGTCTACAAACACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGCAAGACAATGGAAATTTGGTGTTGCTTGGAAAGGATAATACAACAATTATATGGCAGAGTTTCAATTATCCAACAAATACATTGTTGCAAGGACAGAACTTCACAGAGGGAATGAAACTAATCAGTGATCCTAGCCCCAACAACTTGACCTATTCTCTTGAGTTCAATTCAGGAGATGTCAAACTCTATGCTGGTTTCAAGACTCCTCAGCCTTATTGGTCTACGCAGAGTGATAATCGCATGATCATCAATCAAAATGGCGGTGTGGTGGCTTTGGCAACGCTTGCCGAAAAGTCGTGGAGGTTCTATGACAAGACCAGGGCTCTTTTGCGGCAATTCATTTTTGTTAATCTTTCAGGTAATAATGGCACTTGGGTTGCTGTCTTGGGTTCAAATGGGTTAATCACTTTCTTTGATCTTGAAGCTGGAGGATCGAATTCGCCTTCCCAGGCGACAATACCACAAGGATCTTGCAATACGCCTGAAACTTGTGATCCATATAGCATCTGCACAGGGAACAATAAGTGTAACTGCCCTTCTGTTCTGCCTTGCAAGCCAGGTTTCGACTCTGCCTGCAGCGATAAATCCATCACTTTGATGAAAGGTGATTATGGACTCAATTACGTTGCGCTCCAATTTCTTAAGCCGTTTTCGAAGACCAATTTGGAAGGTTGCCAAAAATCTTGCAACGGAAATTGCTCATGCCTTGCCATGTTCTTCCACCTTAGTTCAGGAAACTGTTTCCTATTGGATGACATAGGTAGTTTTCAGAAACCTGGCACTGATTCTGGTTATGTTTCTTACATCAAAATCTCTAGTGATGGAAGAGGTAGTAGCAATGGGGGTAGCGGAGGTGGAAGTAGCAATAAGCACACTATAGTCACAGTGATCATTGTCATAGTAACACTGCTTGTGATTTCTTGCTTGATCTTTGTGGGAATTAGGTGCTACCGGAGGAAGCCAAATGTACCCGAGTCACAAGAGGAGAATTCGGAAGAGGACAACTTCTTGGAGAATCTAACAGGTATGCCAATCCGTTACAGCTACAAGGATCTAGAAGCTGCTACAAATCACTTCTCTGTAAAGCTTGGACAAGGCGGTTTCGGCTCGGTTTACAAAGGAGTGCTACCAGATCGGACTCAAGTAGCAGTGAAGCAGTTGGAAGGTATTGGCCAAGGGAAAAAAGAGTTTAGAGCTGAAGTAAGCATCATTGGAAGCATCCATCACTTGCACTTGGTTAAGCTCAGAGGATTCTGTGTTGAAGGTACTCACAGGCTTCTTGCTTATGAGTACATGGCCAATGGATCATTGGACAAATGGATATTCAAGAAGAACAATGGTGAGTTTCGGTTGGATTGGGATACAAGGTTCAACATAGCGCTCGGCACAGCAAAAGGTCTCGCTTACCTTCACGAAGATTGCGACTCAAAGATCATCCATTGTGACATCAAGCCGGAAAATGTGCTTCTAGATGATCATTTCATGGCGAAAGTATCCGATTTTGGCCTGGCTAAGCTTATGAACCGAGAACAAAGCCATGTCTTCACAACTCTAAGAGGAACTCGAGGGTACCTCGCCCCCGAGTGGATAACAAACTACGCCATATCAGAGAAGAGTGATGTTTACAGCTACGGAATGGTGCTTCTAGAGATCATCGCCGGAAGGAAGAACTATGATCCATCTGAAACCTCAGAGAAATCACATTTCCCAAGCTACGCCATGAAGATGATGGAAGAAGGGAAACTGAGGGAAATCCTTGACTCAGAGTTGAAAGAAGATGTAAATGATGAAAGGGTTCATATAGCTATAAAAGTTGCATTGTGGTGCATACAAGAAGACATGGCAATGAGGCCTTCAATGACCAAAGTAGTGCAAATGCTGGAAGGTCTTTGCACTGTTCCTAAGCCACCAACAAGTTCTGCTAACCTGGGTTCTCGCCTTTTCACCAATGTCTTCAGTCTCAGTGAAGGAGCCACAACTTCTTCAGGTCCATCAGATTGTAACAGTGATGCATATCTCTCTGCTGTTCGTCTTTCAGGACCAAGATAA 2463 0.4312 MMRNHWSFFQIMGTLVLLVIMLLCEVCLGGVQFVGKVYPGSIKGAQMNWVDKDGKFLASSSGKFTFGFATTADDNTKFLVVIVHVKSNTLIWTANRAVPXXNTDXFEFDEXGNVVLNKGETVVWSTNTSGKGVSSMELQDNGNLVLLGKDNTTIIWQSFNYPTNTLLQGQNFTEGMKLISDPSPNNLTYSLEFNSGDVKLYAGFKTPQPYWSTQSDNRMIINQNGGVVALATLAEKSWRFYDKTRALLRQFIFVNLSGNNGTWVAVLGSNGLITFFDLEAGGSNSPSQATIPQGSCNTPETCDPYSICTGNNKCNCPSVLPCKPGFDSACSDKSITLMKGDYGLNYVALQFLKPFSKTNLEGCQKSCNGNCSCLAMFFHLSSGNCFLLDDIGSFQKPGTDSGYVSYIKISSDGRGSSNGGSGGGSSNKHTIVTVIIVIVTLLVISCLIFVGIRCYRRKPNVPESQEENSEEDNFLENLTGMPIRYSYKDLEAATNHFSVKLGQGGFGSVYKGVLPDRTQVAVKQLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCVEGTHRLLAYEYMANGSLDKWIFKKNNGEFRLDWDTRFNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIAGRKNYDPSETSEKSHFPSYAMKMMEEGKLREILDSELKEDVNDERVHIAIKVALWCIQEDMAMRPSMTKVVQMLEGLCTVPKPPTSSANLGSRLFTNVFSLSEGATTSSGPSDCNSDAYLSAVRLSGPR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2106 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 820 - -
Amo08g2106 820 SMART blect_4 48 162 IPR001480 -
Amo08g2106 820 Pfam D-mannose binding lectin 89 173 IPR001480 -
Amo08g2106 820 Pfam Protein kinase domain 498 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2106 820 PIRSF SRK 9 812 IPR024171 GO:0004674
Amo08g2106 820 ProSiteProfiles Bulb-type lectin domain profile. 42 159 IPR001480 -
Amo08g2106 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 820 - -
Amo08g2106 820 CDD STKc_IRAK 501 768 - -
Amo08g2106 820 CDD PAN_AP_plant 355 409 - -
Amo08g2106 820 Gene3D Phosphorylase Kinase; domain 1 460 569 - -
Amo08g2106 820 SMART serkin_6 495 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2106 820 Gene3D Transferase(Phosphotransferase) domain 1 570 775 - -
Amo08g2106 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 214 IPR036426 -
Amo08g2106 820 CDD B_lectin 50 162 IPR001480 -
Amo08g2106 820 Gene3D - 47 161 IPR036426 -
Amo08g2106 820 SUPERFAMILY Protein kinase-like (PK-like) 476 766 IPR011009 -
Amo08g2106 820 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Amo08g2106 820 ProSiteProfiles Protein kinase domain profile. 495 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2106 820 SUPERFAMILY WD40 repeat-like 53 336 IPR036322 GO:0005515
Amo08g2106 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2106 Amo-Chr8 33903116 33906840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2106 442 777 Receptor kinase-like Gene Family AT5G20050 45.658 1.72e-92 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo08g2106 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2106 - - gmx:100791158 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3645 16 147206126 147208955 Amo08g2106 08 33903116 33906840 PCT
Amo06g2849 06 93871529 93874390 Amo08g2106 08 33903116 33906840 PCT
Amo08g2106 08 33903116 33906840 Amo16g3645 16 147206126 147208955 PCT
Amo08g2106 08 33903116 33906840 Amo06g2849 06 93871529 93874390 PCT