Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2105 ATGAGTTCAACTCTGACCAACCATCATCCTCTACTGTGTTCAATCTCCACCGCTTCAGCTTCAGCTCAACAACACAAACCCCTAACCAATTTTCCCGCCAAATCACAACGCTCAACTTTCTCAACCGTTAACTTCCTCTCCAACCACCCTCCTCCTCCTCCATCTTCAGGTCCAAATCTGGTGGTTGGAAGGAGAGGGCTAGTATCCATAGTCACTTTGCCATGTCTTGTTCCCCTGACTCAGATTATGGGTTGTCTCCAAGCGTACGCTGCACAGCCTAGTACAAAGGAATATCTTCTAATTAAAGAAGAAGTAAGGAAGGTATTGTCGAAGGGAAAAGCTGCAGGCGTGCTTCGTTTGGTTTTCCATGATGCAGGAACCTTTGACATGGATGACAAGACAGGTATCTCTGGATCCAAGGGACATGTTAAACTTTCAAAAATGCTTGGATGTAAAATGTTCTATGAAGGATGGGTTATCAATGTTGAAATTTTCATAATCTTGCGAAGTGGTATGAATGGTTCTATAGTTTATGAACTTGAAAGACCAGAAAATTCTGGCCTAAAAAAATCAATAAAGGTTCTGCAGAAAGCAAAGATTCAAATAGATGCTATCCAACCAGTATCCTGGGGGGACATGATTGCTGTTGCTGGCGCCGAAGCAATCGAATTATGTGGAGGTCCATCAATCCAAGTTTCTTTGGGCAGACTAGATTCACAGGGGCCTGACCCTGAAGGGAAACTTCCTGAGGAATCTCTCAATGCTTCCAGTTTGAAGAAATGCTTCCAGAGAAAAGGCTTTTCAACACAAGAACTTGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCAACTTCTTTTGACAATGCATATTATAAGATTCTTTTGGAGAAGCCTTGGGCAAATCCAGGTGGCATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTTGAGGATGACGAATGCTTAAGATGGATCAAGAAATACGCAGAAAATGAGAACATATTCTTTGAAGATTTCAAGAATGCATATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAACCTATAA 1095 0.4256 MSSTLTNHHPLLCSISTASASAQQHKPLTNFPAKSQRSTFSTVNFLSNHPPPPPSSGPNLVVGRRGLVSIVTLPCLVPLTQIMGCLQAYAAQPSTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDMDDKTGISGSKGHVKLSKMLGCKMFYEGWVINVEIFIILRSGMNGSIVYELERPENSGLKKSIKVLQKAKIQIDAIQPVSWGDMIAVAGAEAIELCGGPSIQVSLGRLDSQGPDPEGKLPEESLNASSLKKCFQRKGFSTQELVALSGAHTLGSKGFGSPTSFDNAYYKILLEKPWANPGGMSSMIGLPSDHALVEDDECLRWIKKYAENENIFFEDFKNAYVKLVNSGVRWNNL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2105 364 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 PRINTS Haem peroxidase superfamily signature 285 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 SUPERFAMILY Heme-dependent peroxidases 169 363 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 Gene3D - 170 358 - -
Amo08g2105 364 ProSiteProfiles Plant heme peroxidase family profile. 114 364 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 ProSitePatterns Peroxidases active site signature. 114 125 IPR019794 GO:0004601
Amo08g2105 364 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 40 141 IPR044831 GO:0004601|GO:0034599
Amo08g2105 364 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 171 361 IPR044831 GO:0004601|GO:0034599
Amo08g2105 364 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 171 361 - -
Amo08g2105 364 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 40 141 - -
Amo08g2105 364 Pfam Peroxidase 103 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 Gene3D Peroxidase, domain 2 249 351 - -
Amo08g2105 364 Gene3D - 81 152 - -
Amo08g2105 364 SUPERFAMILY Heme-dependent peroxidases 81 145 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo08g2105 364 ProSitePatterns Peroxidases proximal heme-ligand signature. 271 281 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2105 Amo-Chr8 33897936 33902158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2105 154 362 Peroxidase AT4G16270 28.464 3.99e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2105 K00434 - gmx:100792735 469.929