Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2098 ATGCAGCAGCATCTGCTACATGGGACGCTTAGGGTAACAATATATGAAGCTGATAAGTTGCAAACGGGATGTAATTTGGATTTCTGTGCCAAGGGCACAACACACAAGGGGAAGAGATTCCTAGCCCAAGTCAAAGGATGTCTGCTGTGCAGGCCTGAGATTGTTGGAAGGAGACTATACGCAACAGTTGATCTAGACAAAGCAAGAGTTGGAAGAACAAGAATGATTGGAAACCAACCTTCACACCCAAAATGGAATGAAACATTTCAAATTTACTGCGCTCACACCATCTCTCAAATTGTCTTCACCATTCTCGACGACCAAGACCGTTTCCCACTTCACGGCGCTCGAATTCGCGTAAGCGTTCAATTCTTCGCTGTAACTGATCATGATTACTCCACCGGGATAACGCCGTCGTTTAACGGCGTTCCTAGAACATTCTTCAACATGAGAAAAGGTTGTAAGGTTACACTGTACCAAGACGCTCACGTTCTTCCTGGCGCACTACCTTGGATTCCGTTAACCGTAGGGAGATACTATGATGAGCCTCCACGGTGTTGGGAAGATATTTACAATGCTATCAGGAATGCGAAACATTTGATTTACATAACCGGTTGGTCGGTTTATACCGAGATAACGTTGGTTAGGGACAAAACGACAGGACCTAGTGTCGTTACGCTTGGGGAGATTCTTAAGGAGAGAGCGGAGGAGGGTGTTCGAGTTCTTATGCTTGTTTGGGACGATAGATCTTCCGTGCCGCAGTTTAAGAAAGATGGGTTAATGGGAACTCATGATCAAGAAACAGAACAGTATTTTAGGAATACTAAGGTTAAATGTGTTCTTTGTCCGCGAAATCCTGATGATGGGAGAAGCATTGTTCAGGGGATTCAGACCTCAACAATGTTCACCCATCATCAGAAAAGCGTGGTTGTTGATGGCAATGTCGAAGGGAATAATACTAAAAGAGGGATCATAAGTTTTATTGGCGGGATTGATCTTTGTGATGGAAGATATGATACTCAAGAACATCCTTTGTTTTCGAGTCTAAATACTGTCCACCGTGATGACTTCCATCAACCGAATTTCCCCGGCGCTTCGATCAAGAAAGGCGGCCCGAGGGAGCCGTGGCATGACGTGCATTGCAAGCTAGAAGGACCGGTTGCTTGGGATGTGTTGTACAATTTTGAACAGAGGTGGGAGAAGCAAGTTGGGAAGAATCAGAACCTGTTATTCACACTTGATGAGCTTGATGAAATTGTTGTGCATCCAAGTGAGGCTGCTGCTACATTGGAAGAAGACAGGGATTCTTGGAATGTTCAGTTGTTTAGGTCGATCGATGGCGGCGCAGTTTATGGATTCCCACAAAACCCTGAAGAAGTTGCTGAATTAGGCCTTGTTAGTGGCAAAGACAATGTGATAGATAGAAGCATTCAAGATGCATACATTCATGCGATTCGGCGTGCCAAGAATTTCATCTACATTGAGAATCAGTACTTCCTAGGGAGTTCATATGGTTGGAAATCATCTGATATACAAGTTGAGGATATTAATGCCTTGCAACTTATACCAAAGGAGCTTTCACTCAAGATTTGTAAGAGCATTGAAGCAGGACAAAGGTTTGTTGTGTATGTCGTGATTCCGATGTGGCCGGAAGGTGTGCCTGAAAGTGCTTCAGTTCAGGCAATTTTGGACTGGCAGAGAAGGACTATGGAAATGATGTATAGTGACATTGCTGAGTCCATAAAGAAGAAGGGGATCGAAGCACATCCTAGGGATTATTTGACATTCTTTTGCCTTGGGAAGAGGGAGCCTAAGATGGAAGGTGAATATGTTCCTACACAACAACCTGAACCTGATAGTGACTATATAAGAGCGCAGAATGCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATAATAATTGGTTCAGCCAACATAAACCAAAGATCAATGGATGGGGGAAGAGACACAGAGATAGCAATGGGAGCATTCCAACCACACCAAAGAGTGCCACGTGGCACCAAACCAGAGGGACACGTGCACGCATTCAGAAGAGCCCTATGGTACGAACATCTAGGGGACCCACTTGCACTGGACGAGGTTTTCAACCGCCCAGAAAGTGAGGAGTGTGTGAAGCTTGTGAACCATCTTGCTAAGAAGAATTGGGATTTGTACACTCAAGATGAGTTTGATGTTAACACACCACTTCATCACTTATTGCAGTACCCTGTACACGTGGCAAGTGATGGTACCATAACAACGTTGCCTGGCTTTGAATGTTTTCCGGATACTAAGGCTCATCAAAAGCGTGGTAAAAAAAACATGGTGCATTTGCTGCATGGGAAGCTAGATGTGAGTATATATGAGATTGACAAGCTGCAAAATCCTAAGGGCATAAGTGCAAACCTGGGGAAGAAATGTCTTACCCAACTCAGGAACATTTTTCTCTGCCATTGTCAACCAGAGGTTCTTCCATTGGGTCTATATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGGAGAACAAGAATGATAGATGATCAACCAACAAATCCACATTGGAATGAGAAGTTTCACATATATTGTGCACACTTGATCTCACACATTATATTCACTGTCAAACAAGATAACCCTATTGGGGCAACCCTAATTGGAAGAGCTTATGTCCCAGTTGAACAACTCATTAATGGCAACATTGTTGATACTTGGGCTGAAATACTTGATGAACAACATCATTCTATACAAGGTGGGTCTAAAATCCATGTTAGAATTCAATACTTTGATGTCAAGAATGATTCAAATTGGTCTCAAGGACTAAAGAGTCCACAGTTTCAAGGAGTTCCACACACCTTCTTCAACCAAAAATCTGGCTGCAAAGTTACTCTCTACCAAGATGCACATGTCCAGGACAATTTTTCGCGGCCGATGGCGCCATCCGAAAGAAAATTCTATGAGCCTGCAAGATGCTGGAAAGATATCTACAATGCAATAATTGATGCTAAGCATTTCATTTACATAACTGGTTGGTCTGTTTACACTGAGATAAGTTTGGTTAGGGATCAAAACCAAAGGAATTCAAGTATCAAACTTGGTGAGCTTCTTAAAAAGAAAGCAAATGAAGGTGTCAAGGTTCTAATGCTTGTTTGGGATGATAGAACTTCTGTTCCGGATTTCAAGAAAGATGGTTTGATGGCAACACATGATCAAGAAACAGAACAGTACTTTAAGGACACAGATGTTCATTGCATCTTGTGTCCGAGGAATCCGGACGATGGAAGAAGCATTGTTCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAGAAGAGTGTGATTCTTGATGGCCAAGTTGAGGGAGAATGGAAGAAGCGAAGCGTAGTGAGTTTCATTGGTGGAATTGATCTATGTGATGGAAGATATGATACTCAGGAACATCCTTTGTTTTCCACTTTGAACAATGTCCACCATGATGATTTCCATCAGCCGAATTTCCCCGGCGCTTCCATAAAGAAAGGCGGTCCGAGAGAGCCGTGGCATGACATTCATTGCAAGCTAGAAGGGCCGGTAGCATGGGATGTTATGCACAATTTTCAGCAGAGGTGGGAGAAGCAAGTTGGGAAGATTCTCCTATTCTCTTCTAGCATGCTAGATGATTTTCTTGTGCCTCAAGCAACCTCGGCGAAGTTCAATGATGAAGAGGGTTGGAATGTTCAAGTGTTTAGGTCTATTGATGGTGGTGCTGCTTCAGGATTCCCTGAAGATCCAGAGGAAGCTTGTGAAAGAGGACTTGTTAGTGGAAAAGATAACATCATTGATAGAAGCATTCAAGATGCATACATCAACGCGATTCGTCGAGCGAAGAATTTCATCTACATTGAGAATCAGTACTTTCTAGGGAGTTCATATGGTTGGAAATCATCTGACATAAAAGTTGAGGATATTAATGCTTTGCATCTTATACCAAAAGAACTTTCTTTGAAGATTGTTAGCAAGATTGAAGCAGGGGAGAGGTTTTCAGTCTATGTTGTGATTCCAATGTGGCCGGAAGGAGTGCCGGAGAGTGGCTCGGTTCAAGCAATATTGGATTGGCAGAGGAGGACAATGGAGATGATGTATGCTGATATTGCTGAAGCCATTAGAAGGAAGAGAATTAAAGCACATCCTAGGGACTACTTGACATTCTTCTGCCTTGGAAACCGCGAGGCGAGGCGAGCCGGGGAGTATTCGCCGGCTGAGGCACCTGAGCCTGGCAGTGATTATAGTAGAGCACAAAAGGCCAGGAGATTCATGATCTATGTTCATGCCAAGATGATGATTGTTGATGATGAATACATAATCATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGTGCAAGAGACAGTGAAATTGCAATGGGTGCATTCCAACCATACCACTTAGCATCAAATAATAAGCAACCAAAGGGTCAAATCTATGGTTTCAGGCTTTCATTATGGCATGAACATCTTGGTGACACAAAAGACAAAAGAATCTTATTAGACAATCCAGAGAGTTTGGAATGCATCAAGCTTGTGAACAATCTTGCTGACACAAATTGGGACATATATTCAAAGGAGAATTTTGATGAGAAAAGACCCTTTCACCATCTCATGAAGTACCCTATTGAGGTATCCAACAATGGAACCATAACAACACTTCAAGGGTTTGAACATTTTCCTGATACCAATGCTAAGATTCTTGGTACCAAATCAGATTACCTTCCACCAATTCTCACCACCTAA 4794 0.4266 MQQHLLHGTLRVTIYEADKLQTGCNLDFCAKGTTHKGKRFLAQVKGCLLCRPEIVGRRLYATVDLDKARVGRTRMIGNQPSHPKWNETFQIYCAHTISQIVFTILDDQDRFPLHGARIRVSVQFFAVTDHDYSTGITPSFNGVPRTFFNMRKGCKVTLYQDAHVLPGALPWIPLTVGRYYDEPPRCWEDIYNAIRNAKHLIYITGWSVYTEITLVRDKTTGPSVVTLGEILKERAEEGVRVLMLVWDDRSSVPQFKKDGLMGTHDQETEQYFRNTKVKCVLCPRNPDDGRSIVQGIQTSTMFTHHQKSVVVDGNVEGNNTKRGIISFIGGIDLCDGRYDTQEHPLFSSLNTVHRDDFHQPNFPGASIKKGGPREPWHDVHCKLEGPVAWDVLYNFEQRWEKQVGKNQNLLFTLDELDEIVVHPSEAAATLEEDRDSWNVQLFRSIDGGAVYGFPQNPEEVAELGLVSGKDNVIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYGWKSSDIQVEDINALQLIPKELSLKICKSIEAGQRFVVYVVIPMWPEGVPESASVQAILDWQRRTMEMMYSDIAESIKKKGIEAHPRDYLTFFCLGKREPKMEGEYVPTQQPEPDSDYIRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHQRVPRGTKPEGHVHAFRRALWYEHLGDPLALDEVFNRPESEECVKLVNHLAKKNWDLYTQDEFDVNTPLHHLLQYPVHVASDGTITTLPGFECFPDTKAHQKRGKKNMVHLLHGKLDVSIYEIDKLQNPKGISANLGKKCLTQLRNIFLCHCQPEVLPLGLYATVDLDKARVGRTRMIDDQPTNPHWNEKFHIYCAHLISHIIFTVKQDNPIGATLIGRAYVPVEQLINGNIVDTWAEILDEQHHSIQGGSKIHVRIQYFDVKNDSNWSQGLKSPQFQGVPHTFFNQKSGCKVTLYQDAHVQDNFSRPMAPSERKFYEPARCWKDIYNAIIDAKHFIYITGWSVYTEISLVRDQNQRNSSIKLGELLKKKANEGVKVLMLVWDDRTSVPDFKKDGLMATHDQETEQYFKDTDVHCILCPRNPDDGRSIVQGFEISTMFTHHQKSVILDGQVEGEWKKRSVVSFIGGIDLCDGRYDTQEHPLFSTLNNVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVMHNFQQRWEKQVGKILLFSSSMLDDFLVPQATSAKFNDEEGWNVQVFRSIDGGAASGFPEDPEEACERGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSSDIKVEDINALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGVPESGSVQAILDWQRRTMEMMYADIAEAIRRKRIKAHPRDYLTFFCLGNREARRAGEYSPAEAPEPGSDYSRAQKARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLASNNKQPKGQIYGFRLSLWHEHLGDTKDKRILLDNPESLECIKLVNNLADTNWDIYSKENFDEKRPFHHLMKYPIEVSNNGTITTLQGFEHFPDTNAKILGTKSDYLPPILTT* 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2098 1597 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1111 1148 IPR001736 GO:0003824
Amo08g2098 1597 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 109 IPR035892 -
Amo08g2098 1597 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 787 937 IPR035892 -
Amo08g2098 1597 PANTHER PHOSPHOLIPASE D 784 1597 IPR015679 -
Amo08g2098 1597 PANTHER PHOSPHOLIPASE D ALPHA 3 105 776 - -
Amo08g2098 1597 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1438 1465 IPR001736 GO:0003824
Amo08g2098 1597 Gene3D Endonuclease Chain A 980 1227 - -
Amo08g2098 1597 SMART C2_3c 790 911 IPR000008 -
Amo08g2098 1597 SMART C2_3c 9 132 IPR000008 -
Amo08g2098 1597 PANTHER PHOSPHOLIPASE D ALPHA 3 784 1597 - -
Amo08g2098 1597 PANTHER PHOSPHOLIPASE D ALPHA 3 3 108 - -
Amo08g2098 1597 Gene3D C2 domain 787 947 IPR035892 -
Amo08g2098 1597 SUPERFAMILY Phospholipase D/nuclease 1284 1508 - -
Amo08g2098 1597 ProSiteProfiles C2 domain profile. 1 140 IPR000008 -
Amo08g2098 1597 SUPERFAMILY Phospholipase D/nuclease 138 412 - -
Amo08g2098 1597 Pfam Phospholipase D Active site motif 1439 1465 IPR001736 GO:0003824
Amo08g2098 1597 Pfam Phospholipase D Active site motif 300 337 IPR001736 GO:0003824
Amo08g2098 1597 Pfam Phospholipase D Active site motif 632 658 IPR001736 GO:0003824
Amo08g2098 1597 Pfam Phospholipase D Active site motif 1111 1148 IPR001736 GO:0003824
Amo08g2098 1597 CDD C2_plant_PLD 786 935 - -
Amo08g2098 1597 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 631 658 IPR001736 GO:0003824
Amo08g2098 1597 SMART pld_4 300 337 IPR001736 GO:0003824
Amo08g2098 1597 SMART pld_4 1438 1465 IPR001736 GO:0003824
Amo08g2098 1597 SMART pld_4 631 658 IPR001736 GO:0003824
Amo08g2098 1597 SMART pld_4 1111 1148 IPR001736 GO:0003824
Amo08g2098 1597 Pfam C2 domain 8 110 IPR000008 -
Amo08g2098 1597 Pfam C2 domain 789 913 IPR000008 -
Amo08g2098 1597 PANTHER PHOSPHOLIPASE D 3 108 IPR015679 -
Amo08g2098 1597 ProSiteProfiles C2 domain profile. 771 912 IPR000008 -
Amo08g2098 1597 PANTHER PHOSPHOLIPASE D 105 776 IPR015679 -
Amo08g2098 1597 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 300 337 IPR001736 GO:0003824
Amo08g2098 1597 SUPERFAMILY Phospholipase D/nuclease 940 1220 - -
Amo08g2098 1597 SUPERFAMILY Phospholipase D/nuclease 477 708 - -
Amo08g2098 1597 Gene3D C2 domain 4 123 IPR035892 -
Amo08g2098 1597 Gene3D Endonuclease Chain A 175 431 - -
Amo08g2098 1597 Gene3D Endonuclease Chain A 450 674 - -
Amo08g2098 1597 Gene3D Endonuclease Chain A 1248 1480 - -
Amo08g2098 1597 Pfam Phospholipase D C terminal 1517 1587 IPR024632 -
Amo08g2098 1597 Pfam Phospholipase D C terminal 707 775 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2098 Amo-Chr8 33777485 33793064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2098 1 774 Phospholipase D Gene Family (Wang group) AT3G15730 59.853 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2098 K01115 - gmx:100791688 1281.16