Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2086 ATGACCGTGACTCCATCAACCACCGTGTTTCGATGCTTATTATCGAGTCCTGCTCTTTCTTCTCACTCTCACAATCTTCCACTCACTCTCCCCTTCCACCGCACCCCACTCTTCCGCTCTCTCCTCCTCCCCTCTCGCCGCCACACACTCTGCCCCGCTCTAGCCGCCGCCAACAACAAGAACAAGAGCAACAAAAACAAGAAAAAGTTGTTACGTGATCATGGTACAAAGGGTAATGATGAGGATGAGGAGGAGGATGCTTTTGAGTTGCTGTTCAAGCAACTCGAAGAGGATCTCAAAAAGGATAATTTGTTGAAAGGTGGTAGCAATGATGATGATGACGATGAGATAACTGAAGAGGAACTTGTCTTGTTAGAACGTGAGTTGGAAGGTGCATTGGGGGAATTTGATGCCGAAACGTTAAATCCAGATGTAATTCATGCTGAAACTGATGCTAGTGATAGTGAAGAAGAACAAGAAGAAGAAGTAGATGATGAAGAAGACGGTGTGCCTATGCTTAGAACTTGGCAAATGAAGAAATTGGCTAGGGCTTTGAAAGCTGGCCGCAGAAAAACAAGTATAAAAAATCTTGCTGCTGAGCTTTGTCTTGATAGGGCTTTTGTTATTGAATTGCTCCGCAACCCTCCTCCGAATCTTTTGATGATGAGTTTATCAATACCTGATGAACCTACACCAAAAGAAATATCCGTTGAGACTAAACCTAGAGAGATTGTTCTCGAAGAAACAAGAACAGATCCTGTGGAAGCTGGAAACAAGGCTAACGTACCAGTTCATGTCATGCAACAAAAATGGTCTGCACAAAAGAGATTGAAAAGGGCCCAAGTTGACACACTTGAAAAAGTTTATAGGAGATCAAAGCGACCCACTAATGCAATGATAAGTAGTATAGTGCATGTAACCAACATTCCTCGGAGAAGAGTTGTTAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGTGTTCCAGAGAATCGTGTTCCTTACCAGCGCTCTGTATCAGAAACTAGTTGA 1029 0.4354 MTVTPSTTVFRCLLSSPALSSHSHNLPLTLPFHRTPLFRSLLLPSRRHTLCPALAAANNKNKSNKNKKKLLRDHGTKGNDEDEEEDAFELLFKQLEEDLKKDNLLKGGSNDDDDDEITEEELVLLERELEGALGEFDAETLNPDVIHAETDASDSEEEQEEEVDDEEDGVPMLRTWQMKKLARALKAGRRKTSIKNLAAELCLDRAFVIELLRNPPPNLLMMSLSIPDEPTPKEISVETKPREIVLEETRTDPVEAGNKANVPVHVMQQKWSAQKRLKRAQVDTLEKVYRRSKRPTNAMISSIVHVTNIPRRRVVKWFEDKRAEEGVPENRVPYQRSVSETS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2086 342 Pfam Homeodomain 276 324 IPR001356 GO:0003677
Amo08g2086 342 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 45 337 - -
Amo08g2086 342 Gene3D - 273 330 - -
Amo08g2086 342 MobiDBLite consensus disorder prediction 62 84 - -
Amo08g2086 342 CDD homeodomain 271 323 IPR001356 GO:0003677
Amo08g2086 342 PANTHER HOMEOBOX PROTEIN 8 45 337 - -
Amo08g2086 342 ProSiteProfiles 'Homeobox' domain profile. 268 328 IPR001356 GO:0003677
Amo08g2086 342 SUPERFAMILY Homeodomain-like 271 334 IPR009057 -
Amo08g2086 342 SMART HOX_1 274 332 IPR001356 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Amo08g2086 Homeodomain 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2086 - - ccaj:109796293 331.643