Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2075 CCCAAACCAAAGCGACAAAACCCTAGCCCGGCCGCTGTCTCCGGGTTCTCAGCGCTTCCGCTTCTTCCTCTTCCCCTGTCCGAAACCAGTTCGCCGTCGGATCACCGCTTGCCGTCGTCTCGCCGGTTGCCGTCGTGGCAAACCTACGTCGATGACCACCTTCTCTGCGAAATTGAAGGCAACCACCTCTCCTCCGCCGCAATCGTCGGCCAAGACGGCAGTGTTTGGGCTCAGAGCTCTAATTTCCCTCAGTTCAAGCCTGAGGAAATTACTGCTATCATGAACGACTTTGCTGAGCCTTGA 303 0.571 PKPKRQNPSPAAVSGFSALPLLPLPLSETSSPSDHRLPSSRRLPSWQTYVDDHLLCEIEGNHLSSAAIVGQDGSVWAQSSNFPQFKPEEITAIMNDFAEP* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2075 100 PRINTS Profilin signature 64 73 IPR005455 GO:0003779
Amo08g2075 100 PRINTS Profilin signature 83 100 IPR005455 GO:0003779
Amo08g2075 100 PRINTS Profilin signature 46 55 IPR005455 GO:0003779
Amo08g2075 100 Gene3D Dynein light chain 2a, cytoplasmic 45 100 - -
Amo08g2075 100 PRINTS Plant profilin signature 44 57 IPR005455 GO:0003779
Amo08g2075 100 PRINTS Plant profilin signature 70 83 IPR005455 GO:0003779
Amo08g2075 100 PRINTS Plant profilin signature 95 100 IPR005455 GO:0003779
Amo08g2075 100 Pfam Profilin 45 98 IPR005455 GO:0003779
Amo08g2075 100 PANTHER PROFILIN 45 100 IPR005455 GO:0003779
Amo08g2075 100 PANTHER PROFILIN 45 100 - -
Amo08g2075 100 SUPERFAMILY Profilin (actin-binding protein) 45 100 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2075 Amo-Chr8 33519141 33520050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2075 45 100 Cytoskeleton Gene Families AT2G19760 71.429 1.05e-28 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2075 K05759 - sly:543830 116.316