Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo08g2072 | ATGGATTCCTCTGATGAACCTTCATCATCACCACTACTTTCTGATTCTTCCAATAATCTCAACAATAATAATGATGATCTAGAATCTTCCAAGAACAAGAACAATGAAGACACTACTACTATTCCCTCCCCTTTTGAATCCTCCAATCCCAGCATCAGCAATGATGTAGAAAATTCATCTCCATCAAAGCATCATCATGATCATGATCTTAATGATGATGATTACTTTCTTGGTGAATCATACACACCAGAGCTTGTTCTGTCACCAGAAACCCAATCAATCTTATTAAGTGGCCTACGTATTGGAGACGATGGTGATGTTCTTGAAGATCTTTGTGATAACAACTTCGAATTTAATGTGGAATCATCACAAGAATGGAGAGATTCCAATTTGTTTGCAGATGAGATTCTAGGAATCGAACCTTCCCTTGATCATTATTGTTCAACCTACCCCACGGGTAATGAAGAGGACATTGACCTTATAGAAACAGTGCAATCTGAAGATGAAGTGAATAATAGAAACCTTGTAATAATTGATGCACCAATTCAGGAAGAGGAAGCACCAAACTTCAAGTTGAAGCCTTTTGGTTTGCATTTGAATAGCATCATAAAATCTACAAAAAGGGTTCAACCTGAGACACATGAAAATGTTGTAGTTGGGAGTAGTAGTAGTAATAATAAAATAAAAAGCATTTTGATCTCACAAGGTAGCAATGGAAAATCAGTAGTAAGAGTTGTTGTTGATGAGACTCAGATCCATCAAGACACCACTTCCAATGATAGTGTTCCCATTTCTCATGATCTTAACAAGAGAATAATCCAAGACAGTAGTGAGAGTAATAATGGTTGTACATGTAAGAAGAGTGCATGCTTGCTCCTGTACTGTGAATGTTTTGCTGCTAAAGGTTATTGTGCAGAATGTTGTACTTGTGAAGGATGCTTAAACAGAGAAGAACATGAAGACAAAGTTAATGATGCTAGGGACAAAATCAAATCTCGTAATCCATTTGCATTTTCTCCTGAGATGGTTCCACAACCCACTCACATTCCATCGGCTAGTAACCAAGAAGAAGAAGATGAAGCAGGCAAAGATACATCAAGAGAATCGAAACCAAGTAAATTCTTCACTTATTTGCCACGTGTCGGTTTAGTAGAATCAAACACCATCAGCACTAATTCTACAAAACATGATGATGATGATGACAACATTTATAAAGAGAAACTTAACCAAACTGGTGGAGGATGCAAAAAACATGCATCAAACACAAGTGATGGTAAAAGAGGATGTACATGTAAGAAGAATAAATGTGTGAACCTTTATTGTGAATGTTTTCGTGCTGAAATCTACTGTTCTGAGGCTTGTGCTTGCGAAGGGTGCTTAAATAGAGAAGAACATTTACACAAAATTAATGAAGCTAAGGAATATATTAAAAGGCGTTATCCATTAGCATTTGCTCCAAGGATTGTTCAAACTCATCTTTCCTCCCCCAATAATACGGATAATGAAAATGTTAAGACAGCATCATCATCATCAGCAGCAGCAAGGCACAAAAGAGGTTGCAGATGCATAAAGTCAAATTGTATGCAGAAGTATTGTGTATGTTTTGAGGTTGAGGTTGGATGCTCCAGTCTTTGTGAATGCAAGGAATGCAAAAATCCATATGGCAAGAACAAAGATTCAGGTCATTAG | 1689 | 0.37 | MDSSDEPSSSPLLSDSSNNLNNNNDDLESSKNKNNEDTTTIPSPFESSNPSISNDVENSSPSKHHHDHDLNDDDYFLGESYTPELVLSPETQSILLSGLRIGDDGDVLEDLCDNNFEFNVESSQEWRDSNLFADEILGIEPSLDHYCSTYPTGNEEDIDLIETVQSEDEVNNRNLVIIDAPIQEEEAPNFKLKPFGLHLNSIIKSTKRVQPETHENVVVGSSSSNNKIKSILISQGSNGKSVVRVVVDETQIHQDTTSNDSVPISHDLNKRIIQDSSESNNGCTCKKSACLLLYCECFAAKGYCAECCTCEGCLNREEHEDKVNDARDKIKSRNPFAFSPEMVPQPTHIPSASNQEEEDEAGKDTSRESKPSKFFTYLPRVGLVESNTISTNSTKHDDDDDNIYKEKLNQTGGGCKKHASNTSDGKRGCTCKKNKCVNLYCECFRAEIYCSEACACEGCLNREEHLHKINEAKEYIKRRYPLAFAPRIVQTHLSSPNNTDNENVKTASSSSAAARHKRGCRCIKSNCMQKYCVCFEVEVGCSSLCECKECKNPYGKNKDSGH* | 563 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo08g2072 | 562 | Coils | Coil | 17 | 37 | - | - | |
Amo08g2072 | 562 | ProSiteProfiles | CRC domain profile. | 425 | 555 | IPR005172 | - | |
Amo08g2072 | 562 | ProSiteProfiles | CRC domain profile. | 279 | 342 | IPR005172 | - | |
Amo08g2072 | 562 | MobiDBLite | consensus disorder prediction | 59 | 75 | - | - | |
Amo08g2072 | 562 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 281 | 316 | IPR005172 | - | |
Amo08g2072 | 562 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 518 | 552 | IPR005172 | - | |
Amo08g2072 | 562 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 427 | 462 | IPR005172 | - | |
Amo08g2072 | 562 | SMART | CXC_2 | 424 | 465 | IPR033467 | - | |
Amo08g2072 | 562 | SMART | CXC_2 | 515 | 556 | IPR033467 | - | |
Amo08g2072 | 562 | SMART | CXC_2 | 278 | 319 | IPR033467 | - | |
Amo08g2072 | 562 | MobiDBLite | consensus disorder prediction | 353 | 370 | - | - | |
Amo08g2072 | 562 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 4 | 70 | 356 | - | - | |
Amo08g2072 | 562 | MobiDBLite | consensus disorder prediction | 333 | 370 | - | - | |
Amo08g2072 | 562 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 4 | 356 | 557 | - | - | |
Amo08g2072 | 562 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Amo08g2072 | 562 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
Amo08g2072 | 562 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 2 | 356 | 557 | IPR044522 | GO:0003700 | |
Amo08g2072 | 562 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 2 | 70 | 356 | IPR044522 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo08g2072 | Amo-Chr8 | 33503528 | 33508060 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo08g2072 | 392 | 560 | CPP Transcription Factor Family | AT4G14770 | 39.655 | 3.74e-33 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | CPP | Amo08g2072 | TCR | 3.9e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo08g2072 | K21776 | - | gmx:547664 | 182.57 |