Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2062 ATGGGGAAGATGGGAACCCCATTTAAGGGAATAATTCAAGATGTAAAAGGAAGAGCTGAATGCTACAAGCAAGATTGGGTTTTGTCATTCTGCTCTGGTCTAAGATTATTGGCTCCAACATTCTACATATTCTTTGCTTCTGCTCTCCCTGTCATTGCTTTTGGAGAACAACTAAGTAGAGATACAGATGGAAGCTTGAGCACTGTAGAAGCATTGGCATCTACTGCAATTTGTGGAATTATTCACTCTATAATTGGTGGCCAGCCTTTGTTGATTGTAGGAGTTGCTGAACCAACTGTTATAATGTACAGTTATCTCTACAATTTCAGCAAGAAAACACCTGAACTTGGTGCAAAACTCTTTCTGCCTTGGGCTGGATGGGTTAATGTATGGAGTGCACTCTTCTTGATTGTGCTTGGGATTTTTAATGCTTGCACTGTGATAACGAGGTTTACAAGGGTTGCGGGGGAGTTGTTCGGCATGCTAATTACTGTTCTTTTCTTTCAACAGGCTATTAAGGGATTGGTTGAGGAGTTCGGCACGCCGAAGAATGAAAACCAGTTGGCAGAAGAGTTTCAATTCCAATGGAGGTACATTAATGGATTGCTTGGAATCATTTTCTCTTTTGGAGTACTTGTCACTTCCCTTAAAACCAGAAAAGCAAGAACATGGCTATATGGAACAGGGTGGCTACGAAGTTTTATTGCAGATTATGGGGTTCCATTGATGGTAGTGTTATGGACTGCACTGTCTTATGTTGTGCCAGGCAAAGTTCCCGAAGGTGTTCCTCGAAGGTTGGTTTCTCCGCTTCCTTGGGAATCTGCATCTCTGTATCACTGGACAGTAGTGAAGGATATGGGGCAGGTTCCCTTTCTTTACATAGTTGCGGCAATTATTCCGGCTTTCATGATAGCAGGACTATACTTTTTCGATCATAGTGTATCTTCCCAGATGGCTCAACAGGAGGAATTCAATCTTCAAAAGCCATCTGCCTACCACTATGATATGTTTCTGCTTGGAATAATGACTTTGATTTGCGGTCTCCTTGGCCTTCCTCCATCAAATGGAGTCATTCCGCAATCTCCCATGCATACAAAGAGTTTGGCAGTTCTTAGAAAGCAGTTGATCCGAAAGGAAGTGGTAAAAAGTGCCAAGGAATGCATTAAGCTGAAAAAGACAAAGTCTGAAATATATGGCAAGATGCAAGCTGTCTTTGAAGAGATGGATACAGATCCTACTGCCAAAGAGTTGGAGAATTTGAAGGAAGCTGTAATGAACCCTGATGCCAAGGATGGTACAAAGAAAAATTTTGATCTTGAGGAACACATAGATGACTATCTACCAGTCCGGGTTAATGAGCAAAGAATGACCAACTTAATGCAGTCCCTTCTGATTGGCCTCTCAGTTTTGGCCATCTCTATTATCAAAAGGATACCTACCTCGGTTTTATGGGGATATTTCGCTTACATGGCAATCGATAGTCTACCAGGGAATCAGTTTTGGGAAAGGATATTGCTTCTCTTCATCGCTCCAAGACGACGTTCTAGAATTTTGGAAGGTTCTCATGCCTCATTTGTGGAGACAGTACCATTCAAGACCATAGCCGCTTTTACTGGCTTCCAGTTAGCATATTTCGCAGTCTGTTATGGAATGACATGGATACCTATAGGTGGAATTTTGTTTCCACTACCATTCTTCCTTCTCATACTTGTAAGGGAGCACCTGCTTCCAAGACTCTTCAAACCTCGAGATCTTCAAGAACTAGACGCTTCCGAATATGAGGAGATTCTTGGTGCTCCACGCGGTTCCCTTAGTATGTCACTGCAGGATAAGGAACCGGGGGATAGCGATGAGAGTGTAGAAGATTATTGTGATGCTGAGATATTGGATGAGATGACAACCAGTAGGGGAGAGTTGAAACTCAGAGCTGTGAGCTTCAATGATGGGAACTCCAACAATGATGGAAACCGCAGTTTCAATGTTAGAAATCGCAGCTTCAATGTTAGAAATCGCCGCAGCTTCAATGCTAGATACCGCCACAGTTTCAATGATAGATACCTCCATAGCTTCAATGGAAATGCTGTTTGA 2088 0.4253 MGKMGTPFKGIIQDVKGRAECYKQDWVLSFCSGLRLLAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVEALASTAICGIIHSIIGGQPLLIVGVAEPTVIMYSYLYNFSKKTPELGAKLFLPWAGWVNVWSALFLIVLGIFNACTVITRFTRVAGELFGMLITVLFFQQAIKGLVEEFGTPKNENQLAEEFQFQWRYINGLLGIIFSFGVLVTSLKTRKARTWLYGTGWLRSFIADYGVPLMVVLWTALSYVVPGKVPEGVPRRLVSPLPWESASLYHWTVVKDMGQVPFLYIVAAIIPAFMIAGLYFFDHSVSSQMAQQEEFNLQKPSAYHYDMFLLGIMTLICGLLGLPPSNGVIPQSPMHTKSLAVLRKQLIRKEVVKSAKECIKLKKTKSEIYGKMQAVFEEMDTDPTAKELENLKEAVMNPDAKDGTKKNFDLEEHIDDYLPVRVNEQRMTNLMQSLLIGLSVLAISIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFIAPRRRSRILEGSHASFVETVPFKTIAAFTGFQLAYFAVCYGMTWIPIGGILFPLPFFLLILVREHLLPRLFKPRDLQELDASEYEEILGAPRGSLSMSLQDKEPGDSDESVEDYCDAEILDEMTTSRGELKLRAVSFNDGNSNNDGNRSFNVRNRSFNVRNRRSFNARYRHSFNDRYLHSFNGNAV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2062 695 PANTHER BORON TRANSPORTER-LIKE PROTEIN 4 668 - -
Amo08g2062 695 Gene3D Helical hairpin bin 18 60 - -
Amo08g2062 695 Pfam HCO3- transporter family 449 539 IPR011531 GO:0006820|GO:0016021
Amo08g2062 695 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016021
Amo08g2062 695 Pfam HCO3- transporter family 201 374 IPR011531 GO:0006820|GO:0016021
Amo08g2062 695 PANTHER ANION EXCHANGE PROTEIN 4 668 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2062 Amo-Chr8 33378161 33381898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2062 7 652 Antiporters AT4G32510 66.464 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2062 K24194 - gmx:100787412 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g2890 06 94468015 94471396 Amo08g2062 08 33378161 33381898 PCT
Amo08g2062 08 33378161 33381898 Amo06g2890 06 94468015 94471396 PCT