Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2060 ATGTATAGTTATCTTTACAAATTTAGCATAAGCCTTCCTGCAATTGGCAAAGAGCTCTTTTTGCCTTGGGCTGGATGGGTTTGTGTATGGAGTGCACTTTTCTTGATTCTACTTGCAATTTTTAATGCTTGTTCAGTTATCACAAGGTTTACAAGAGTTGCGGGCGAATTGTTTGGCATGCTAATTACAGTTCTCTTTTTTCAGGAGGCTGTAAAGGGAGTAGTCGAGGAATTCAGGGAGCCAAAATCTGAACATGGAGAAAAAGCTGAATTCTATTGGCAATACATTAACGGATTGTTTGCAGTCATTTTCGCTTTTGGAGTTCTTCTCACTTCCATGAAGACCAGGAAAGCAAGATCATGGCTATATGGAACAGGGTGGATGAGGAGCCTTCTTGCGGATTATGGGATTCCCTTGATGGTAGTGTTATGGACAGCAGTATCTTATGCTAAGCCAAGAGGTGTTCCTAAAGATGTTCCTAGAAGGTTGGATTCTCCACTTCCATGGGAACCTCAATCTCTCTATCATTGGACTATAGTAAAGGACATGGGGAAGGTGCCGATTCCTTATATATTCGCGGGGATTATTCCGGCAGTGATGATAGCGGGATTATACTTTTTCGATCATAACGTAGCTTCCCAAATGGCTCAACAACATGAGTACAATCTTCAAAAGCCATCTTCCTACCACTATGATATGCTTTTGCTTGGAATAATGACTCTGATCTGCGGTCTCCTGGGCGTTCCTCCGTCAAACGGAGTCCTTCCGCAGTCTCCAATGCATACAAAAAGTTTGGCAGTTCTTAAGAGACAGATGCTCCGAAAGAAAATGGTGAAAAGTGCCCGGGAATGCATTAGGATGAACAAGACCAATTCTGAAATATACGGAGAGATGCATGATGTTCTCAGACGAATGGATGCTGAGCCTACTGCTAGAGAGTTGCAGAATTTGAGAGAAGCTGTAATGAACCCTGACAACAAGGATGGAACTTCTAAAGGTTTTGATCCTGAGAAACACATAGATGAGCACCTACCAGTCAGGGTTAAAGAGCAAAGAGTGTCCAACTTATTGCAGTCCATTCTGATCGGCCTATCCGTTTTAGCCATCTCTGTTATCAAAAGGATACCTACCTCCGTTTTATGGGGATATTTCGCTTACATGGCAATCGATAGTTTACCCGGCAATCAATTCTGGGAAAGGATACTACTTCTCTTCGTCACTAAGAGCCGCCGTACCAGGCAAGTATATAATTTAATTTTGGAAGGTTCTCATGCCTCATATGTGGAGACAGTACCATATAAAACGATAGTTACTTTTACAGCCTTGCAAATATTATACTTTGGAATCTGTTTTGGGTTGACATGGGTGCCAGTAGGTGGAATCTTGTTTCCACTACCATTCTTCCTTCTCATTGTTATAAGGGAACGCTTGCTTCCCAAAATGTTCAACCCGGACCATCTCAAAGAACTTGATTCCTCTGAATATGAGGAGGTTGAGGGTGCTCCGCAACTGGAACCTGACACCGAGGACAGCGGAGAAGAAGATGAGTTCTGTGATGCAGAGCTATTGGATGAGATGACAACACACAGGGGAGAGTTGAAACATAGAAACGTGAGCTTCGATAGAGGCCAACGCACCTCCGTTGATCATGTTTGA 1656 0.43 MYSYLYKFSISLPAIGKELFLPWAGWVCVWSALFLILLAIFNACSVITRFTRVAGELFGMLITVLFFQEAVKGVVEEFREPKSEHGEKAEFYWQYINGLFAVIFAFGVLLTSMKTRKARSWLYGTGWMRSLLADYGIPLMVVLWTAVSYAKPRGVPKDVPRRLDSPLPWEPQSLYHWTIVKDMGKVPIPYIFAGIIPAVMIAGLYFFDHNVASQMAQQHEYNLQKPSSYHYDMLLLGIMTLICGLLGVPPSNGVLPQSPMHTKSLAVLKRQMLRKKMVKSARECIRMNKTNSEIYGEMHDVLRRMDAEPTARELQNLREAVMNPDNKDGTSKGFDPEKHIDEHLPVRVKEQRVSNLLQSILIGLSVLAISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTKSRRTRQVYNLILEGSHASYVETVPYKTIVTFTALQILYFGICFGLTWVPVGGILFPLPFFLLIVIRERLLPKMFNPDHLKELDSSEYEEVEGAPQLEPDTEDSGEEDEFCDAELLDEMTTHRGELKHRNVSFDRGQRTSVDHV* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2060 551 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 542 - -
Amo08g2060 551 PANTHER ANION EXCHANGE PROTEIN 1 542 IPR003020 GO:0005452|GO:0006820|GO:0016020
Amo08g2060 551 MobiDBLite consensus disorder prediction 493 517 - -
Amo08g2060 551 Pfam HCO3- transporter family 346 441 IPR011531 GO:0006820|GO:0016021
Amo08g2060 551 Pfam HCO3- transporter family 20 82 IPR011531 GO:0006820|GO:0016021
Amo08g2060 551 Pfam HCO3- transporter family 98 271 IPR011531 GO:0006820|GO:0016021
Amo08g2060 551 MobiDBLite consensus disorder prediction 496 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2060 Amo-Chr8 33357642 33362729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2060 1 545 Antiporters AT1G15460 62.167 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2060 K24194 - gmx:100792745 801.586