Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2054 ATGGAGGAAATTGAAGGGTTCAATTGTGGTGAAAGTAAGAGCCCCATTGATGGTCGACCTCCGAATCCACCTTCTTCTGCTGCCTCTGCCTTTCGCCAATGCCATCACAACAAGAAACCCCTTGTTCGCCATCCTTCTCTTATGATGACAAAACTTTCTGATGTATCCGCTGAACCGGAGCGTGCCACTGAAGATTGTCAGTCTGATTTCCTTCCAAAACTTCGTTCTGGAGGATGTGGTAATATGGGGTTCCGGTCAAGTATGGAAGATGTTTATGTTTGCGTTGACAACTTTATGCAAGAGAATGGACTCAAGAACCATATAGACGGACCTAGTGCTTTCTACGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGATTTTGCTTGCCACCATTTGCCAAAGTTCATTATTCAAGATGATGATTTTCCAAGTGATATTGAGAGGATAATTGCTTCAGCATTTCTGCAAACGGACAATGCCTTCGCAGAAGCCTGCTCTCTGGATGCTACCCTTGCATCTGGCACTACGGCATTGGCTGCTCTTGTTATTGGAAGGCAACTGGTGGTAGCAAATGCTGGAGATTGCCGAGCTGTGCTGTGTCGGCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAGAAGAAGCGTATTGAGGCATCTGGGGGATATGTCTATGATGGATATCTTAATGGACAACTCAATGTTGCTCGTGCTATTGGCGACTGGCACGTGGAAGGGATGAAAAGCCGAGGCGGGGGACCACTCAGCGCAGAACCTGAGTTTATGAGTACAAAACTCACCGCCGAGGATGAATTCCTCATAATTGGTTGCGACGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTGGACTTTGCTCGCCGCAGGCTTCAGGAACATAATGACCCCACCATGTGTAGCAAGGATTTGGTTGATGAGGCTTTAAAAAGAAAGAGTGGAGACAATTTATCTGCTGTTGTAATTTGCTTCCAGCAACAACCTCCGCCTAACTTGGTGGTGCCGCGCTCGAGAGTGCACAGGAGCTTCTCTGCCGAAGGCTTGAGGGAGTTGCAAAGCTTCCTGGATAACTTAGGTAATTGA 1125 0.4693 MEEIEGFNCGESKSPIDGRPPNPPSSAASAFRQCHHNKKPLVRHPSLMMTKLSDVSAEPERATEDCQSDFLPKLRSGGCGNMGFRSSMEDVYVCVDNFMQENGLKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIIQDDDFPSDIERIIASAFLQTDNAFAEACSLDATLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHVEGMKSRGGGPLSAEPEFMSTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVICFQQQPPPNLVVPRSRVHRSFSAEGLRELQSFLDNLGN* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2054 374 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 48 360 - -
Amo08g2054 374 SMART PP2C_4 65 336 IPR001932 -
Amo08g2054 374 MobiDBLite consensus disorder prediction 1 31 - -
Amo08g2054 374 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Amo08g2054 374 Gene3D - 51 342 IPR036457 -
Amo08g2054 374 CDD PP2Cc 75 338 IPR001932 -
Amo08g2054 374 PANTHER PROTEIN PHOSPHATASE 2C 48 360 IPR015655 GO:0004722|GO:0006470
Amo08g2054 374 Pfam Protein phosphatase 2C 76 330 IPR001932 -
Amo08g2054 374 ProSiteProfiles PPM-type phosphatase domain profile. 75 338 IPR001932 -
Amo08g2054 374 SUPERFAMILY PP2C-like 69 340 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2054 Amo-Chr8 33235420 33238758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2054 1 374 PP2C-type Phosphatase Gene Family AT2G25620 66.327 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2054 K14803 - gmx:100815725 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2054 08 33235420 33238758 Amo18g3394 18 136113734 136117055 hybridization