Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2049 ATGTTGAAGAAGAAGAATGGAATGGCAAATTCCTCATTTTTGCTTCAGCATCTAGAATTGAGTACTTATCTATACATAGAGCTGCAGGCCCAGATCTTCTTCAAGCTTGCCTCAAGGTTCCAGAAGTCAGGCCTGGAATCCACTGCCCAACAGGGGAAGCAAGGATCACGCCTGACATTGTATTCTGAAATTGGTTTCAGAAATAGCTTGAAGGTTGCAAAAGAGAACAGCATTCAGTATATAGCATTCCCAGCCATATCATGTGGTGCCTGTGGCAAATTTCTACTTAACCAATGTTTAAAATCGCAGTCTACATTGCTACATTCGCAGCCTAAGTCAACAGTTGGAACACCAGCATATACTGCTCCAGAGGTTTTGTCTCGAAAGGAGTATGATGAAAAGATTGCAGATGTTTGGTCATGTGGGGTGACTTTGTATGTAATGTTAGTTGGAGCATACCCATTTGAAGATCTAGAAGATCCTAAAGACTTTAGAAAGACTATTGGGTTCAGAATAATGAGCGTGCAGTATTCTATACCTGATTATGTGCGTCTTCCTTCAGAGTGTAGGCATCTTCTCACTCGCATTTTTGTTGCCAATCCAGCCAAGGCAAAGGATTACTATTTCGGAGATAAAACAGCACACATGATTCTTGAAGAACTTCCCTAG 669 0.4141 MLKKKNGMANSSFLLQHLELSTYLYIELQAQIFFKLASRFQKSGLESTAQQGKQGSRLTLYSEIGFRNSLKVAKENSIQYIAFPAISCGACGKFLLNQCLKSQSTLLHSQPKSTVGTPAYTAPEVLSRKEYDEKIADVWSCGVTLYVMLVGAYPFEDLEDPKDFRKTIGFRIMSVQYSIPDYVRLPSECRHLLTRIFVANPAKAKDYYFGDKTAHMILEELP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2049 222 Gene3D Leucine Aminopeptidase, subunit E, domain 1 50 98 IPR043472 -
Amo08g2049 222 Gene3D Transferase(Phosphotransferase) domain 1 99 210 - -
Amo08g2049 222 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2F 102 203 - -
Amo08g2049 222 SUPERFAMILY Protein kinase-like (PK-like) 111 203 IPR011009 -
Amo08g2049 222 Pfam Protein kinase domain 109 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2049 222 SMART serkin_6 15 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2049 222 SUPERFAMILY Macro domain-like 65 92 IPR043472 -
Amo08g2049 222 ProSiteProfiles Protein kinase domain profile. 1 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo08g2049 222 PANTHER SERINE/THREONINE KINASE 102 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g2049 Amo-Chr8 33116367 33119122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2049 101 201 CBL-interacting serine-threonine protein kinases AT5G45820 44.554 5.33e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo08g2049 Pkinase 9.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2049 K14498 - rcu:8276056 180.259