Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g2042 ATGGCACAGCCACAGCCACAGCCACAGCAACACCACCATCATCACAACAACAACAATGGCGGTGGTAGCACCACCCAAAAACAACACCACCATGTTCTCCATGACTTTCTCGGCATGAAGCCCAACAACGATATACGCCTCTCTACTGACCTCTCACCTTCCTCTTCCTCCGCCGCTGCACGCGGCCCCTTCTCCTCCTCCGCCGCCTCCGACATCGCTTCCGAAAAACAGGTAGGGAATCATCTTGAAGGGGTTCCATACTATGGTCCACGAAGTGATTTTTCTGGCACCGAGATAAGCAACAGATTAGTGGGAAACAAGAGAAGCAATTCTGATTCTACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGATTCCTTTCAAAACTCTCATTTGATGAAGGTCCTTCGTAGTGCTGCCGGAGGAGAGAAGCTTAGAAGGCCAAATGATGATGAAGTGTTGCTCGGTATGCAGTCGCTGAAGCCAATGTCTGCTTCTCTATTTCAGCCTCCTACAAGTTCCAAGCTTGATGCCAATAAATGGGAACGATCTTTACTCATGAATGTTGGCCCTTCCATGCAGCATCCCCCGCGTGGAGGTCAACTGACGCCGTTTGTACACCAAATAGCCTCAAACAAAATGAGGGATGCCAATGCCGGTCCTTCATTTATTTCTCAGTCAGCTGCTGATGAAGGATCTAGAACAGGAATTAAGGGCCCTGGCATTTTAAGTTCCATAAACCCAACTGCTTTGGGCATTGAGAAATCATCATCTGCAGGGTTTCTTGGTGGAAGCAGGACAAAGACTGTAAGTAATGTAGTGGACCCCGAATCATCGACACTTCCAAGTCAACATGGCCAAAAATCTTCCAGCCGCCAGATGACTATATTTTACGGGGGTCAGGCTCATGTTTTCGATGATGTCCACCCTCACAAGGCAGATGTTATAATGTCTTTAGCCGGATCAAATGGCGGATCATGGTCAACTGCATTCTCGCCGAAATCTTCTGTAAAGCTGGCGAATGATAGTAACTTGCATAGTGGAGAGAACGACACGGGTATCCCACATGATCTTCACGGGAGGTTGCCTATTACTGGAAGTTCTAGCCATGCCATTGTGCCTGGTGATCGAATATCTACTCCGGCAGTTGTAGTGGCAAACCAGGGAAGCATTGTATCTAAACATACAAGAAATCCTGTTCAAGCATCTGAACCCAGATCTGAAGACAAAAAAAGAGCACAATGA 1254 0.4761 MAQPQPQPQQHHHHHNNNNGGGSTTQKQHHHVLHDFLGMKPNNDIRLSTDLSPSSSSAAARGPFSSSAASDIASEKQVGNHLEGVPYYGPRSDFSGTEISNRLVGNKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRSAAGGEKLRRPNDDEVLLGMQSLKPMSASLFQPPTSSKLDANKWERSLLMNVGPSMQHPPRGGQLTPFVHQIASNKMRDANAGPSFISQSAADEGSRTGIKGPGILSSINPTALGIEKSSSAGFLGGSRTKTVSNVVDPESSTLPSQHGQKSSSRQMTIFYGGQAHVFDDVHPHKADVIMSLAGSNGGSWSTAFSPKSSVKLANDSNLHSGENDTGIPHDLHGRLPITGSSSHAIVPGDRISTPAVVVANQGSIVSKHTRNPVQASEPRSEDKKRAQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g2042 417 MobiDBLite consensus disorder prediction 1 72 - -
Amo08g2042 417 Pfam tify domain 292 324 IPR010399 -
Amo08g2042 417 ProSiteProfiles Tify domain profile. 290 325 IPR010399 -
Amo08g2042 417 MobiDBLite consensus disorder prediction 1 27 - -
Amo08g2042 417 MobiDBLite consensus disorder prediction 344 376 - -
Amo08g2042 417 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 61 414 IPR040390 -
Amo08g2042 417 PANTHER PROTEIN TIFY 8 61 414 - -
Amo08g2042 417 MobiDBLite consensus disorder prediction 45 72 - -
Amo08g2042 417 MobiDBLite consensus disorder prediction 392 417 - -
Amo08g2042 417 SMART tify_2 290 325 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g2042 27 323 Tify Gene Family AT4G32570 38.679 6.98e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Amo08g2042 tify 1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g2042 - - ahf:112707837 771.541