Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1966 ATGGATGCCACCGGCAATATGTTCTGTGATTCTGATCTTGTTAACCCTCTTAGCTCAATGGGGATGCAAGTGGCATGCATTCTTGTTGTCTCACACTTCTTCAATGTTGTGCTAAAAACAATGGGTCAAACTGGCCCTGTTGCACAAATTCTGGCTGGTTTGGTACTAGGACCAATGTCACATATTAATTATATAAAGAAGACTTTTTTCCCTGCAAGTTCAATAAACTACTATGAAGTGGTGAGCTTCTTCTGCCGCATACTCTTCATGTTCTTGTTTGGTTTAGAGATGAACATTCATTACACACTGCGGAATTGGCGTCTAGTATGCTTGGTGGCTTGTGGTGGTGGATTAATGGGTGCCATCTTTGGTATTTCTGTCTCTTTTTATTTGTACCAAGAGTTACAATCCAATGCACCTATGCAATATTTTTGTATGATCATCATGCTTGTCATATCATACACAAGCTCCCCTATGGTCATTCGTCTGGCGGCCGAGTTGAGGTTTGGTGCGTCCGACGTCGGCCGAATCGCCGTGTCTGCTGCCGTGATCACAGAGATGGGATGCTTGGTGTTCTTCAATATAATGGTTAATTTCAATAAGAAAAGATTCTTCTATAGTTTTGCTTGCATTTCAGTCACTGGCGTAGTCATTGTTATAAACAGGTACTTAGCCGTTTGGTTGAATGGGAGAAACCGAAACCAAAAGTACCTGAAGGCTCCTGAGCTGTTACTAATCTTGTTTTTGCTTCTAGTGAGTTCCATGGTCATAGAAATTTGGGGTTTCAACAGTATTCTTAACTGTTTCTTGATAGGCCTTGCATTTCCAAGGGAAGGCAAATCAGCTAGAACACTTCTCCATAAACTCGGCTATTCAATTTACAATTTTGTCCTTCCAGTCTACTTTGGATACTTAGGGTTACAATGCGACATTATCAACGCTTTCTGGAACTTGAATCGCTTGACGAATGTCGCCATCTTGGTCCTGTTAGGGATTGGAAGCAAGCTCAGTGGCACTCTTCTTGTGTGCCGTTACCTTCAGTATCCAACTAGTGAAGGAATCTTCCTTGGATTTGTGTTGAACACAAGAGGCTATGCTGATCTTCTCTTTATTGGTGCCTCTGCTAAGCAAGTTATTACTTTTGATCCAGAAGCTTACAATGTGTTGCTAGTATCAATAGTACTCAACACAGTCATATCTGGGATAACTGTGGCTTTTCTATCAAGAGGGGAAGAGAGATTGTTTGTAACAAACCATACTGCATTGGAGCCACAGAGCTTGGAAGATGAGCTTCGAATTCTGGCTTGTGTATACGATCCTCGCCAAGTGTCTGCAGTATTATCCACAGTTCTAGCATTACATGGCAATAAGCAAACACCATCGACCACCTATTTGATGCATTTGATAGAGCTTGTTAAGAAGATCAAGACTAACGTGCTGTTTCATGAAAAGGAAACCGCCGAGATTAGCGACGACGAAGACTATGGTGGCAATGATGTGGTGGATATTAATAATGCATTAGATGCTTTCACTGCAGACACAAAGGTTTTGGTACACCAAAGAAGGGCAGTGTCTTCTTTCCCAACTCTTTATGAAGATGTTTGCAATGATGCAGAAGATCTTCAGGTATCAATCATTATACTTCCCTTTCACAAGCACCAGCGAATTGATGGAAAACTGGAGAGTGGAAAAGAAGGGATAAGAATTACAAACCAGAAAGTTCTAAGGCATGCTCCTTGTTCTGTTGGTGTGATTATTGAAAGAGGACTTGCCAGATCCCCTGGTTTCTCAAATCTAATTTCATCTGATAACATACAAAATGTTGCAACACTTTTCTTTGGCGGCGCAGATGATCGTGAGGCGATTGCTTGGAGCTTACGAATCTCCAAGCATCCGCGCGTCAATCTGACAATAATTAGATTCTTGCTGTCCTCTTCTGCTGTACAAAATGAACAGATCAAAAGTGGAGAATCCGAGGAAAAAGAGATTTTGATGTCGCTGACTGGAGAAGAGACGGTGAATGAGATTGATAACACATTCATGGTTGATTTCTATAACAGGTATGTGACTTCAGGCCAAATTGGATATGTGGAGAAGTTTGTACATGATGGAGCAGAAACATTAGAATGTCTAAAAGAGAATGGGGATTTATACGCTTTGTTTATAGTAGGAAGGGGTGGTAGAGGGCAATGTTCATTAACAATTGGTATGAGTGATTGGGAAGAGTGTCCTGAACTTGGTACAGTTGGTGATATTTTGGCTTCTTCAGATTTTGATATTCAAGGCTCAGTTTTAGTGGTTCAACAACACAGAGATGCCAAGAAAGGCATAATAAGTGATTAG 2343 0.4114 MDATGNMFCDSDLVNPLSSMGMQVACILVVSHFFNVVLKTMGQTGPVAQILAGLVLGPMSHINYIKKTFFPASSINYYEVVSFFCRILFMFLFGLEMNIHYTLRNWRLVCLVACGGGLMGAIFGISVSFYLYQELQSNAPMQYFCMIIMLVISYTSSPMVIRLAAELRFGASDVGRIAVSAAVITEMGCLVFFNIMVNFNKKRFFYSFACISVTGVVIVINRYLAVWLNGRNRNQKYLKAPELLLILFLLLVSSMVIEIWGFNSILNCFLIGLAFPREGKSARTLLHKLGYSIYNFVLPVYFGYLGLQCDIINAFWNLNRLTNVAILVLLGIGSKLSGTLLVCRYLQYPTSEGIFLGFVLNTRGYADLLFIGASAKQVITFDPEAYNVLLVSIVLNTVISGITVAFLSRGEERLFVTNHTALEPQSLEDELRILACVYDPRQVSAVLSTVLALHGNKQTPSTTYLMHLIELVKKIKTNVLFHEKETAEISDDEDYGGNDVVDINNALDAFTADTKVLVHQRRAVSSFPTLYEDVCNDAEDLQVSIIILPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIIERGLARSPGFSNLISSDNIQNVATLFFGGADDREAIAWSLRISKHPRVNLTIIRFLLSSSAVQNEQIKSGESEEKEILMSLTGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVHDGAETLECLKENGDLYALFIVGRGGRGQCSLTIGMSDWEECPELGTVGDILASSDFDIQGSVLVVQQHRDAKKGIISD* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1966 780 Pfam Sodium/hydrogen exchanger family 27 407 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo08g1966 780 Gene3D - 19 414 IPR038770 -
Amo08g1966 780 PANTHER CATION/H(+) ANTIPORTER 1 21 770 - -
Amo08g1966 780 PANTHER CATION/H + ANTIPORTER 21 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1966 Amo-Chr8 31900353 31905874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1966 7 780 Antiporter Super Family AT1G16380 39.623 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1966 - - gmx:100804522 1261.51