Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1926 CGGGTAGCCACTCTCTCATTTCTAAGGTTAAAAAAAAACTCCTTTCTCTATTCAAATACACACTCATTCCCTTCACACTCGCTCCTCATTTCAATTACTCTCACTTACACTCTCCTATTTTCTTTTTTTCAAGAGTGCATGCTTCCATACATGATCAGGATAGTCACCATGGTCAATCCAAACCCAACTCTTGAAAAGTTTGCAAGGCATCTCCATCTCCATTCTGCTCTTTCCTCCGACATCCAAAGCAACGATGGATCCTTCCGCCGCCCTGCTTTAAACCAAAGGCGAACATTCTCGAATTACTCGAATCCTGCCTTGCACATGCCAACATGCAAATCAACAACTGACTTCTTTACCGTTACAACTGCCACAACGTCTCCTGTCTTTGTGGCAGCTCCTGCAGAGAAGGGCAACTTCTTTATTGACTTCATGATGGGCGGAGTGTCGGCTGCCGTGTCGAAAACGGCGGCGGCTCCGATCGAACGAGTGAAGCTTTTGATCCAAAATCAAGATGAGATGATTAAACAAGGAAGACTTGCTCAGCCATACAAGGGTATTGGTGACTGCTTTAGTCGAACAATTGCTGATGAGGGCGTGGTTTCTCTTTGGAGAGGTAACACTGCAAATGTGATTCGCTATTTCCCCACTCAGGCTCTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAGAGACGGTTACTGGAAATGGTTTGCTGGAAACTTGGCATCAGGAGGTGCAGCTGGAGCCTCATCGCTCTTCTTTGTATACTCTCTTGACTACGCCCGTACTCGTCTTGCTAATGACGCTAAGGCTGCTAAGAAGGGTGGCGGCGACAGGCAGTTTAACGGTCTCGTCGACGTCTACAAGAAGACGTTGGCTTCCGACGGCATCGCCGGTCTTTACCGTGGTTTCAACATTTCCTGCGTCGGTATCATCGTCTATCGCGGTCTCTACTTTGGAATGTATGATTCTCTCAAGCCAGTTCTCTTGACTGGATCTTTGCAGGATAGCTTTTTTGCGAGCTTTGCTCTGGGGTGGCTGATCACCAATGGTGCTGGGCTTGCATCATACCCAATTGACACAGTTAGGAGAAGAATGATGATGACCTCTGGTACAGCTGTGAAGTACAAGAGCTCCATGGATGCATTTACACAAATCCTCCAGAATGAGGGTGCCAAGTCCTTGTTCAAGGGTGCTGGTGCTAACATCCTTCGCGCCATCGCCGGCGCCGGTGTACTTGCTGGCTATGACAAGTTGCAGGTTATTATGTTTGGCAAGAAGTATGGATCCGGCGGTGCTTAG 1326 0.4751 RVATLSFLRLKKNSFLYSNTHSFPSHSLLISITLTYTLLFSFFQECMLPYMIRIVTMVNPNPTLEKFARHLHLHSALSSDIQSNDGSFRRPALNQRRTFSNYSNPALHMPTCKSTTDFFTVTTATTSPVFVAAPAEKGNFFIDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLAQPYKGIGDCFSRTIADEGVVSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGDRQFNGLVDVYKKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGTAVKYKSSMDAFTQILQNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQVIMFGKKYGSGGA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1926 441 SUPERFAMILY Mitochondrial carrier 138 426 IPR023395 -
Amo08g1926 441 Gene3D Mitochondrial carrier domain 141 437 IPR023395 -
Amo08g1926 441 ProSiteProfiles Solute carrier (Solcar) repeat profile. 344 430 IPR018108 -
Amo08g1926 441 PRINTS Mitochondrial carrier protein signature 143 156 IPR002067 GO:0055085
Amo08g1926 441 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085
Amo08g1926 441 PRINTS Mitochondrial carrier protein signature 156 170 IPR002067 GO:0055085
Amo08g1926 441 PRINTS Mitochondrial carrier protein signature 309 327 IPR002067 GO:0055085
Amo08g1926 441 PRINTS Mitochondrial carrier protein signature 206 226 IPR002067 GO:0055085
Amo08g1926 441 PRINTS Mitochondrial carrier protein signature 353 375 IPR002067 GO:0055085
Amo08g1926 441 PRINTS Adenine nucleotide translocator signature 184 205 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo08g1926 441 PRINTS Adenine nucleotide translocator signature 217 229 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo08g1926 441 PRINTS Adenine nucleotide translocator signature 140 152 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo08g1926 441 PRINTS Adenine nucleotide translocator signature 243 256 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo08g1926 441 PRINTS Adenine nucleotide translocator signature 349 365 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo08g1926 441 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 63 441 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Amo08g1926 441 Pfam Mitochondrial carrier protein 139 235 IPR018108 -
Amo08g1926 441 Pfam Mitochondrial carrier protein 345 431 IPR018108 -
Amo08g1926 441 Pfam Mitochondrial carrier protein 242 339 IPR018108 -
Amo08g1926 441 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 231 IPR018108 -
Amo08g1926 441 ProSiteProfiles Solute carrier (Solcar) repeat profile. 243 336 IPR018108 -
Amo08g1926 441 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 63 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1926 Amo-Chr8 31442678 31445887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1926 61 441 Antiporters AT5G13490 79.481 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1926 K05863 - gmx:100789942 617.461